Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026928348.2 |
| length | 972 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 5 |
| gene id | srp19 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 15378942 ~ 15384824 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | biological_process |
| GO:0008152 | metabolic process | biological_process |
| GO:0048500 | signal recognition particle | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008312 | 7S RNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU157456 | lncRNA | upstream | 14971 | 15354461 ~ 15363971 (+) | True | G133307 |
| TU157435 | lncRNA | upstream | 34911 | 15343754 ~ 15344031 (+) | True | G133306 |
| TU157377 | lncRNA | upstream | 79555 | 15299184 ~ 15299387 (+) | True | G133260 |
| TU157332 | lncRNA | upstream | 169096 | 15209515 ~ 15209846 (+) | True | G133220 |
| TU157181 | lncRNA | upstream | 396069 | 14943077 ~ 14982873 (+) | False | commd10 |
| TU157491 | lncRNA | downstream | 17013 | 15401446 ~ 15401762 (+) | True | G133330 |
| TU157510 | lncRNA | downstream | 40756 | 15425189 ~ 15426372 (+) | True | G133342 |
| TU157574 | lncRNA | downstream | 212975 | 15597408 ~ 15606339 (+) | True | G133386 |
| XR_004578565.1 | lncRNA | downstream | 246020 | 15630453 ~ 15640958 (+) | True | LOC117597798 |
| XR_004578566.1 | lncRNA | downstream | 253485 | 15637918 ~ 15640958 (+) | False | LOC117597798 |
| XM_034306506.1 | mRNA | upstream | 14918 | 15357916 ~ 15364024 (+) | True | LOC113531612 |
| XM_034306505.1 | mRNA | upstream | 14918 | 15357916 ~ 15364024 (+) | False | LOC113531612 |
| XM_026922449.2 | mRNA | upstream | 14918 | 15358122 ~ 15364024 (+) | False | LOC113531612 |
| XM_026922457.2 | mRNA | upstream | 14918 | 15358122 ~ 15364024 (+) | False | LOC113531612 |
| XM_034306508.1 | mRNA | upstream | 14918 | 15358122 ~ 15364024 (+) | False | LOC113531612 |
| XM_026922605.2 | mRNA | downstream | 13839 | 15398272 ~ 15402724 (+) | True | lrrc2 |
| XM_026930898.2 | mRNA | downstream | 34031 | 15418464 ~ 15439687 (+) | True | spinb |
| XM_026930912.2 | mRNA | downstream | 34031 | 15418464 ~ 15439687 (+) | False | spinb |
| XM_026930904.2 | mRNA | downstream | 34031 | 15418464 ~ 15439687 (+) | False | spinb |
| XM_026930890.2 | mRNA | downstream | 34032 | 15418465 ~ 15439687 (+) | False | spinb |
| trnae-cuc_19 | other | upstream | 399038 | 14979833 ~ 14979904 (+) | True | trnae-cuc_19 |
| TU156645 | other | upstream | 1055492 | 14322172 ~ 14323450 (+) | True | G132595 |
| TU156117 | other | upstream | 1671392 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| trnae-cuc_18 | other | upstream | 2009323 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| trnaf-gaa_25 | other | upstream | 2314820 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| TU157849 | other | downstream | 617628 | 16002061 ~ 16011604 (+) | False | G133631 |
| TU157866 | other | downstream | 617628 | 16002061 ~ 16018783 (+) | True | G133631 |
| XR_004578524.1 | other | downstream | 1018315 | 16402748 ~ 16419509 (+) | False | si:ch211-166a6.5 |
| TU158258 | other | downstream | 1195824 | 16580257 ~ 16594403 (+) | False | mtmr3 |
| TU158254 | other | downstream | 1196020 | 16580453 ~ 16594403 (+) | False | mtmr3 |
