Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU27777 |
| length | 286 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G23417 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 7883528 ~ 7883813 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU27688 | lncRNA | downstream | 173318 | 7705127 ~ 7710210 (-) | True | G23330 |
| TU27695 | lncRNA | downstream | 208194 | 7672700 ~ 7675334 (-) | True | G23337 |
| TU27226 | lncRNA | downstream | 1082709 | 6799518 ~ 6800819 (-) | True | G22896 |
| TU27070 | lncRNA | downstream | 1117836 | 6718275 ~ 6765692 (-) | True | G22743 |
| TU27026 | lncRNA | downstream | 1199798 | 6683454 ~ 6683730 (-) | True | G22699 |
| TU27786 | lncRNA | upstream | 22512 | 7906325 ~ 7907008 (-) | True | G23426 |
| TU27787 | lncRNA | upstream | 29883 | 7913696 ~ 7914794 (-) | True | G23427 |
| TU27788 | lncRNA | upstream | 31796 | 7915609 ~ 7916592 (-) | True | G23428 |
| TU27784 | lncRNA | upstream | 41352 | 7925165 ~ 7925431 (-) | True | G23424 |
| TU27782 | lncRNA | upstream | 43294 | 7927107 ~ 7928716 (-) | True | G23422 |
| XM_026929753.2 | mRNA | downstream | 61470 | 7788563 ~ 7822058 (-) | True | gxylt2 |
| XM_026925761.2 | mRNA | downstream | 97079 | 7778190 ~ 7786449 (-) | True | ppp4r2b |
| XM_034298664.1 | mRNA | downstream | 97313 | 7778190 ~ 7786215 (-) | False | ppp4r2b |
| XM_026914958.2 | mRNA | downstream | 513009 | 7282007 ~ 7370519 (-) | False | chl1b |
| XM_026914939.2 | mRNA | downstream | 513009 | 7282007 ~ 7370519 (-) | True | chl1b |
| XM_026923857.2 | mRNA | upstream | 107401 | 7991214 ~ 7993623 (-) | True | gpr27 |
| XM_026921551.2 | mRNA | upstream | 376672 | 8260485 ~ 8265229 (-) | False | mitfa |
| XM_026921537.2 | mRNA | upstream | 376672 | 8260485 ~ 8265229 (-) | True | mitfa |
| XM_026920277.2 | mRNA | upstream | 459811 | 8343624 ~ 8351633 (-) | True | arl6ip5a |
| XM_026921828.2 | mRNA | upstream | 597236 | 8481049 ~ 8484147 (-) | False | tcta |
| TU26888 | other | downstream | 1403517 | 6479402 ~ 6480011 (-) | True | G22591 |
| XR_004577391.1 | other | downstream | 1806651 | 6074035 ~ 6076877 (-) | False | LOC117596222 |
| TU26421 | other | downstream | 2347468 | 5534124 ~ 5536060 (-) | False | romo1 |
| TU26420 | other | downstream | 2347521 | 5534124 ~ 5536007 (-) | False | romo1 |
| XR_003403148.2 | other | downstream | 2682316 | 5111463 ~ 5201212 (-) | False | LOC113530384 |
| XR_004580309.1 | other | upstream | 378806 | 8262619 ~ 8265229 (-) | False | mitfa |
| TU28034 | other | upstream | 597238 | 8481051 ~ 8484029 (-) | False | tcta |
| TU28035 | other | upstream | 597238 | 8481051 ~ 8484181 (-) | False | tcta |
| TU28036 | other | upstream | 597238 | 8481051 ~ 8484114 (-) | False | tcta |
| TU28673 | other | upstream | 1551750 | 9435563 ~ 9441810 (-) | False | tusc2a |
