Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU29342 |
| length | 1003 |
| RNA type | TUCP |
| GC content | 0.64 |
| exon number | 1 |
| gene id | G24760 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 10489293 ~ 10490295 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU29196 | lncRNA | downstream | 318118 | 10170970 ~ 10171175 (-) | True | G24623 |
| TU29193 | lncRNA | downstream | 320824 | 10168211 ~ 10168469 (-) | True | G24620 |
| TU29190 | lncRNA | downstream | 328052 | 10161032 ~ 10161241 (-) | True | G24617 |
| TU29184 | lncRNA | downstream | 337128 | 10151817 ~ 10152165 (-) | True | G24611 |
| TU29143 | lncRNA | downstream | 550250 | 9938256 ~ 9939043 (-) | True | G24572 |
| TU29745 | lncRNA | upstream | 438556 | 10928851 ~ 10934133 (-) | False | itcha |
| XR_003403497.2 | lncRNA | upstream | 476401 | 10966696 ~ 10984007 (-) | True | LOC113534445 |
| TU29800 | lncRNA | upstream | 531228 | 11021523 ~ 11021725 (-) | True | G25184 |
| TU29801 | lncRNA | upstream | 532144 | 11022439 ~ 11022641 (-) | True | G25185 |
| XR_004579523.1 | lncRNA | upstream | 767469 | 11257764 ~ 11262304 (-) | True | LOC117599085 |
| XM_026940250.2 | mRNA | downstream | 149966 | 10335393 ~ 10339327 (-) | False | gcnt7 |
| XM_026940181.2 | mRNA | downstream | 149966 | 10335393 ~ 10339327 (-) | True | gcnt7 |
| XM_026925110.2 | mRNA | downstream | 230074 | 10241254 ~ 10259219 (-) | True | eya2 |
| XM_026925117.2 | mRNA | downstream | 230075 | 10241254 ~ 10259218 (-) | False | eya2 |
| XM_026923241.2 | mRNA | downstream | 269912 | 10213908 ~ 10219381 (-) | True | LOC113532087 |
| XM_034299696.1 | mRNA | upstream | 62616 | 10552911 ~ 10685886 (-) | True | LOC113532783 |
| XM_034299692.1 | mRNA | upstream | 64138 | 10554433 ~ 10743445 (-) | False | LOC113532783 |
| XM_034299687.1 | mRNA | upstream | 64138 | 10554433 ~ 10743445 (-) | False | LOC113532783 |
| XM_026924421.2 | mRNA | upstream | 64138 | 10554433 ~ 10743436 (-) | False | LOC113532783 |
| XM_034299689.1 | mRNA | upstream | 64138 | 10554433 ~ 10720376 (-) | False | LOC113532783 |
| TU29080 | other | downstream | 621015 | 9863367 ~ 9868278 (-) | False | G24516 |
| TU28828 | other | downstream | 770323 | 9715527 ~ 9718970 (-) | False | tnnt2b |
| TU28673 | other | downstream | 1047483 | 9435563 ~ 9441810 (-) | False | tusc2a |
| TU28035 | other | downstream | 2005112 | 8481051 ~ 8484181 (-) | False | tcta |
| TU28036 | other | downstream | 2005179 | 8481051 ~ 8484114 (-) | False | tcta |
| XR_003403751.2 | other | upstream | 2748409 | 13238704 ~ 13238806 (-) | True | LOC113537313 |
| TU31648 | other | upstream | 3008310 | 13498605 ~ 13499984 (-) | False | slc5a8l |
| TU31814 | other | upstream | 3141967 | 13632262 ~ 13634652 (-) | False | rps26l |
| XR_004579719.1 | other | upstream | 3383419 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU31994 | other | upstream | 3560106 | 14050401 ~ 14058445 (-) | True | G27107 |
