Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU30226 |
| length | 1051 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G25570 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 11737567 ~ 11738741 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU30209 | lncRNA | downstream | 39489 | 11697079 ~ 11698078 (-) | True | G25553 |
| TU30133 | lncRNA | downstream | 203042 | 11517488 ~ 11534525 (-) | True | G25478 |
| TU30139 | lncRNA | downstream | 237059 | 11499245 ~ 11500508 (-) | True | G25484 |
| TU30126 | lncRNA | downstream | 252188 | 11484864 ~ 11485379 (-) | False | kif5ab |
| TU30130 | lncRNA | downstream | 279377 | 11457974 ~ 11458190 (-) | True | G25476 |
| TU30231 | lncRNA | upstream | 13746 | 11752487 ~ 11753680 (-) | True | G25575 |
| TU30232 | lncRNA | upstream | 13746 | 11752487 ~ 11772290 (-) | False | G25575 |
| TU30403 | lncRNA | upstream | 198874 | 11937615 ~ 11937803 (-) | True | G25723 |
| XR_004577361.1 | lncRNA | upstream | 474247 | 12212988 ~ 12214771 (-) | True | LOC117596184 |
| TU30538 | lncRNA | upstream | 475023 | 12213764 ~ 12214802 (-) | False | LOC117596184 |
| XM_026912940.2 | mRNA | downstream | 46853 | 11686807 ~ 11690714 (-) | True | LOC113526127 |
| XM_026922964.2 | mRNA | downstream | 76578 | 11618971 ~ 11660989 (-) | True | gli1 |
| XM_034312345.1 | mRNA | downstream | 125272 | 11586904 ~ 11612295 (-) | True | LOC113531982 |
| XM_026922382.2 | mRNA | downstream | 201529 | 11522121 ~ 11536038 (-) | True | mars1 |
| XM_026918429.2 | mRNA | downstream | 222937 | 11500588 ~ 11514630 (-) | True | mbd6 |
| XM_034300344.1 | mRNA | upstream | 244221 | 11982962 ~ 11994574 (-) | False | rbm19 |
| XM_026915768.2 | mRNA | upstream | 244221 | 11982962 ~ 11994574 (-) | True | rbm19 |
| XM_026915754.2 | mRNA | upstream | 258222 | 11996963 ~ 12008819 (-) | True | epha2a |
| XM_034299710.1 | mRNA | upstream | 287987 | 12026728 ~ 12028660 (-) | True | LOC117596078 |
| XM_034313231.1 | mRNA | upstream | 296891 | 12035632 ~ 12041298 (-) | False | tardbp |
| TU29342 | other | downstream | 1247272 | 10489293 ~ 10490295 (-) | True | G24760 |
| TU29080 | other | downstream | 1869289 | 9863367 ~ 9868278 (-) | False | G24516 |
| TU28828 | other | downstream | 2018597 | 9715527 ~ 9718970 (-) | False | tnnt2b |
| TU28673 | other | downstream | 2295757 | 9435563 ~ 9441810 (-) | False | tusc2a |
| TU28036 | other | downstream | 3253453 | 8481051 ~ 8484114 (-) | False | tcta |
| XR_003403751.2 | other | upstream | 1499963 | 13238704 ~ 13238806 (-) | True | LOC113537313 |
| TU31648 | other | upstream | 1759864 | 13498605 ~ 13499984 (-) | False | slc5a8l |
| TU31814 | other | upstream | 1893521 | 13632262 ~ 13634652 (-) | False | rps26l |
| XR_004579719.1 | other | upstream | 2134973 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU31994 | other | upstream | 2311660 | 14050401 ~ 14058445 (-) | True | G27107 |
