Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU31648 |
| length | 1085 |
| RNA type | TUCP |
| GC content | 0.40 |
| exon number | 3 |
| gene id | slc5a8l |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 13493512 ~ 13502170 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU31647 | lncRNA | downstream | 2744 | 13493512 ~ 13495861 (-) | False | slc5a8l |
| TU31421 | lncRNA | downstream | 322446 | 13175077 ~ 13176159 (-) | True | G26613 |
| TU31418 | lncRNA | downstream | 328943 | 13169253 ~ 13169662 (-) | True | G26610 |
| TU31379 | lncRNA | downstream | 392519 | 13104457 ~ 13106086 (-) | True | G26585 |
| TU31363 | lncRNA | downstream | 427782 | 13070595 ~ 13070823 (-) | True | G26570 |
| TU31618 | lncRNA | upstream | 10392 | 13510376 ~ 13568936 (-) | True | G26788 |
| TU31828 | lncRNA | upstream | 141180 | 13641164 ~ 13646894 (-) | False | fkbp11 |
| TU31831 | lncRNA | upstream | 147463 | 13647447 ~ 13694820 (-) | False | G26970 |
| TU31830 | lncRNA | upstream | 155488 | 13655472 ~ 13694820 (-) | True | G26970 |
| TU31846 | lncRNA | upstream | 184139 | 13684123 ~ 13685782 (-) | True | G26985 |
| XM_026926108.2 | mRNA | downstream | 5346 | 13490194 ~ 13493259 (-) | False | si:ch211-105j21.9 |
| XM_026926098.2 | mRNA | downstream | 5346 | 13490194 ~ 13493259 (-) | True | si:ch211-105j21.9 |
| XM_026926279.2 | mRNA | downstream | 246694 | 13234936 ~ 13251911 (-) | True | ppm1j |
| XM_026922711.2 | mRNA | downstream | 266865 | 13214941 ~ 13231740 (-) | True | rhoca |
| XM_026927218.2 | mRNA | downstream | 309056 | 13177828 ~ 13189549 (-) | True | capza1a |
| XM_026914240.2 | mRNA | upstream | 16196 | 13516180 ~ 13530635 (-) | True | tspan2a |
| XM_034298028.1 | mRNA | upstream | 32997 | 13532981 ~ 13544134 (-) | False | ngfb |
| XM_034298017.1 | mRNA | upstream | 32997 | 13532981 ~ 13544134 (-) | False | ngfb |
| XM_026925656.2 | mRNA | upstream | 32997 | 13532981 ~ 13544134 (-) | False | ngfb |
| XM_034298022.1 | mRNA | upstream | 32997 | 13532981 ~ 13544134 (-) | False | ngfb |
| XR_003403751.2 | other | downstream | 259799 | 13238704 ~ 13238806 (-) | True | LOC113537313 |
| TU29342 | other | downstream | 3008310 | 10489293 ~ 10490295 (-) | True | G24760 |
| TU29080 | other | downstream | 3630327 | 9863367 ~ 9868278 (-) | False | G24516 |
| TU28828 | other | downstream | 3779635 | 9715527 ~ 9718970 (-) | False | tnnt2b |
| TU28673 | other | downstream | 4056795 | 9435563 ~ 9441810 (-) | False | tusc2a |
| TU31814 | other | upstream | 132278 | 13632262 ~ 13634652 (-) | False | rps26l |
| XR_004579719.1 | other | upstream | 373730 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU31994 | other | upstream | 550417 | 14050401 ~ 14058445 (-) | True | G27107 |
| trnae-cuc_5 | other | upstream | 892296 | 14392280 ~ 14392351 (-) | True | trnae-cuc_5 |
| XR_003403256.2 | other | upstream | 1372964 | 14872948 ~ 14875990 (-) | False | pxmp4 |
