Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU32377 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.28 |
| exon number | 1 |
| gene id | G27448 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 14790431 ~ 14790641 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32201 | lncRNA | downstream | 297592 | 14492637 ~ 14492839 (-) | True | G27303 |
| TU32157 | lncRNA | downstream | 336140 | 14444626 ~ 14454291 (-) | True | G27259 |
| TU32152 | lncRNA | downstream | 389002 | 14354841 ~ 14401429 (-) | True | G27254 |
| XR_004577242.1 | lncRNA | downstream | 539167 | 14238795 ~ 14251264 (-) | True | LOC117596067 |
| TU32061 | lncRNA | downstream | 617510 | 14172672 ~ 14172921 (-) | True | G27169 |
| TU32421 | lncRNA | upstream | 69364 | 14860005 ~ 14860246 (-) | True | G27484 |
| TU32441 | lncRNA | upstream | 93614 | 14884255 ~ 14884487 (-) | True | G27502 |
| TU32551 | lncRNA | upstream | 219684 | 15010325 ~ 15010661 (-) | True | G27600 |
| TU32615 | lncRNA | upstream | 274244 | 15064885 ~ 15065211 (-) | True | G27652 |
| TU32663 | lncRNA | upstream | 339362 | 15130003 ~ 15130260 (-) | True | G27699 |
| XM_026919235.2 | mRNA | downstream | 88396 | 14600663 ~ 14702035 (-) | False | dlgap4b |
| XM_026919227.2 | mRNA | downstream | 88396 | 14600663 ~ 14702035 (-) | True | dlgap4b |
| XM_026919252.2 | mRNA | downstream | 88397 | 14600663 ~ 14702034 (-) | False | dlgap4b |
| XM_026919244.2 | mRNA | downstream | 88397 | 14600663 ~ 14702034 (-) | False | dlgap4b |
| XM_034314129.1 | mRNA | downstream | 191885 | 14591405 ~ 14598546 (-) | False | LOC113529797 |
| XM_026913137.2 | mRNA | upstream | 6996 | 14797637 ~ 14814447 (-) | True | vstm2l |
| XM_026913225.2 | mRNA | upstream | 6996 | 14797637 ~ 14814444 (-) | False | vstm2l |
| XM_026923672.2 | mRNA | upstream | 72326 | 14862967 ~ 14869703 (-) | False | tgm5l |
| XM_026923681.2 | mRNA | upstream | 72359 | 14863000 ~ 14869703 (-) | False | tgm5l |
| XM_026923663.2 | mRNA | upstream | 72592 | 14863233 ~ 14869703 (-) | True | tgm5l |
| trnae-cuc_5 | other | downstream | 398080 | 14392280 ~ 14392351 (-) | True | trnae-cuc_5 |
| TU31994 | other | downstream | 731986 | 14050401 ~ 14058445 (-) | True | G27107 |
| XR_004579719.1 | other | downstream | 883242 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU31814 | other | downstream | 1155779 | 13632262 ~ 13634652 (-) | False | rps26l |
| TU31648 | other | downstream | 1290447 | 13498605 ~ 13499984 (-) | False | slc5a8l |
| XR_003403256.2 | other | upstream | 82307 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| XR_003403257.2 | other | upstream | 82308 | 14872949 ~ 14875990 (-) | False | pxmp4 |
| TU32819 | other | upstream | 506668 | 15297309 ~ 15299019 (-) | True | G27843 |
| TU32916 | other | upstream | 665994 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32920 | other | upstream | 671309 | 15461950 ~ 15469229 (-) | False | oxtr |
