Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU32551 |
| length | 337 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G27600 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 15010325 ~ 15010661 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32441 | lncRNA | downstream | 125838 | 14884255 ~ 14884487 (-) | True | G27502 |
| TU32421 | lncRNA | downstream | 150079 | 14860005 ~ 14860246 (-) | True | G27484 |
| TU32377 | lncRNA | downstream | 219684 | 14790431 ~ 14790641 (-) | True | G27448 |
| TU32201 | lncRNA | downstream | 517486 | 14492637 ~ 14492839 (-) | True | G27303 |
| TU32157 | lncRNA | downstream | 556034 | 14444626 ~ 14454291 (-) | True | G27259 |
| TU32615 | lncRNA | upstream | 54224 | 15064885 ~ 15065211 (-) | True | G27652 |
| TU32663 | lncRNA | upstream | 119342 | 15130003 ~ 15130260 (-) | True | G27699 |
| TU32669 | lncRNA | upstream | 134044 | 15144705 ~ 15146155 (-) | True | G27705 |
| TU32670 | lncRNA | upstream | 140151 | 15150812 ~ 15151049 (-) | True | G27706 |
| TU32777 | lncRNA | upstream | 233654 | 15244315 ~ 15246353 (-) | True | G27801 |
| XM_026927231.2 | mRNA | downstream | 1142 | 14887465 ~ 15009183 (-) | True | LOC113534431 |
| XM_034300435.1 | mRNA | downstream | 1142 | 14890435 ~ 15009183 (-) | False | LOC113534431 |
| XM_034300444.1 | mRNA | downstream | 36274 | 14890435 ~ 14974051 (-) | False | LOC113534431 |
| XM_026922260.2 | mRNA | downstream | 134335 | 14872949 ~ 14875990 (-) | False | pxmp4 |
| XM_026922253.2 | mRNA | downstream | 134335 | 14872949 ~ 14875990 (-) | True | pxmp4 |
| XM_026929263.2 | mRNA | upstream | 166 | 15010827 ~ 15024533 (-) | True | LOC113535748 |
| XM_026929270.2 | mRNA | upstream | 166 | 15010827 ~ 15016270 (-) | False | LOC113535748 |
| XM_026929243.2 | mRNA | upstream | 14466 | 15025127 ~ 15032562 (-) | True | zmynd10 |
| XM_034313981.1 | mRNA | upstream | 14466 | 15025127 ~ 15032501 (-) | False | zmynd10 |
| XM_034313979.1 | mRNA | upstream | 14466 | 15025127 ~ 15031645 (-) | False | zmynd10 |
| XR_003403256.2 | other | downstream | 134335 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| XR_003403257.2 | other | downstream | 134335 | 14872949 ~ 14875990 (-) | False | pxmp4 |
| trnae-cuc_5 | other | downstream | 617974 | 14392280 ~ 14392351 (-) | True | trnae-cuc_5 |
| TU31994 | other | downstream | 951880 | 14050401 ~ 14058445 (-) | True | G27107 |
| XR_004579719.1 | other | downstream | 1103136 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU32819 | other | upstream | 286648 | 15297309 ~ 15299019 (-) | True | G27843 |
| TU32916 | other | upstream | 445974 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32920 | other | upstream | 451289 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU34409 | other | upstream | 2262294 | 17272955 ~ 17280173 (-) | True | G29158 |
| XR_004577384.1 | other | upstream | 2503051 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
