Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403011.2 |
| length | 496 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 4 |
| gene id | LOC113528975 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 17423871 ~ 17429778 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34417 | lncRNA | downstream | 29405 | 17394766 ~ 17396199 (-) | True | G29166 |
| TU34418 | lncRNA | downstream | 31137 | 17393458 ~ 17394467 (-) | True | G29167 |
| TU34351 | lncRNA | downstream | 370948 | 17054088 ~ 17054656 (-) | True | G29119 |
| TU33936 | lncRNA | downstream | 854080 | 16570790 ~ 16571524 (-) | True | G28779 |
| TU33657 | lncRNA | downstream | 935689 | 16462102 ~ 16489915 (-) | False | G28537 |
| TU34426 | lncRNA | upstream | 3967 | 17433453 ~ 17434168 (-) | True | G29174 |
| TU34432 | lncRNA | upstream | 24799 | 17454285 ~ 17468157 (-) | True | G29176 |
| TU34442 | lncRNA | upstream | 42844 | 17472330 ~ 17529204 (-) | True | si:dkey-44g17.6 |
| TU34457 | lncRNA | upstream | 57875 | 17487361 ~ 17511455 (-) | True | G29196 |
| TU34475 | lncRNA | upstream | 207841 | 17637327 ~ 17638017 (-) | True | G29213 |
| XM_026917735.2 | mRNA | downstream | 131599 | 17220584 ~ 17294005 (-) | False | pbx1b |
| XM_026917727.2 | mRNA | downstream | 131599 | 17220584 ~ 17294005 (-) | True | pbx1b |
| XM_026930064.2 | mRNA | downstream | 222355 | 17197989 ~ 17203249 (-) | True | LOC113536221 |
| XM_026943221.2 | mRNA | downstream | 234145 | 17186645 ~ 17191459 (-) | True | med8 |
| XM_034313348.1 | mRNA | downstream | 256253 | 17066355 ~ 17169351 (-) | False | szt2 |
| XM_034312419.1 | mRNA | upstream | 9154 | 17438640 ~ 17462625 (-) | True | sec16b |
| XM_026917852.2 | mRNA | upstream | 43960 | 17473446 ~ 17529301 (-) | False | si:dkey-44g17.6 |
| XM_026917861.2 | mRNA | upstream | 43960 | 17473446 ~ 17529300 (-) | False | si:dkey-44g17.6 |
| XM_026917841.2 | mRNA | upstream | 43960 | 17473446 ~ 17529298 (-) | False | si:dkey-44g17.6 |
| XM_026917804.2 | mRNA | upstream | 101073 | 17530559 ~ 17539905 (-) | True | dr1 |
| TU34409 | other | downstream | 145431 | 17272955 ~ 17280173 (-) | True | G29158 |
| TU32920 | other | downstream | 1956375 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU32916 | other | downstream | 1964603 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32819 | other | downstream | 2126585 | 15297309 ~ 15299019 (-) | True | G27843 |
| XR_003403257.2 | other | downstream | 2549614 | 14872949 ~ 14875990 (-) | False | pxmp4 |
| XR_004577384.1 | other | upstream | 84226 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
| TU34529 | other | upstream | 519671 | 17949157 ~ 17949718 (-) | True | G29263 |
| TU34546 | other | upstream | 641501 | 18070987 ~ 18072909 (-) | True | G29279 |
| trnae-cuc_6 | other | upstream | 1147738 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
| TU34886 | other | upstream | 1364546 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
