Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU34432 |
| length | 865 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G29176 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 17454285 ~ 17468157 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34426 | lncRNA | downstream | 20117 | 17433453 ~ 17434168 (-) | True | G29174 |
| TU34423 | lncRNA | downstream | 24507 | 17423871 ~ 17429778 (-) | True | LOC113528975 |
| XR_003403011.2 | lncRNA | downstream | 24799 | 17425604 ~ 17429486 (-) | False | LOC113528975 |
| XR_003403015.2 | lncRNA | downstream | 24805 | 17425604 ~ 17429480 (-) | False | LOC113528975 |
| XR_004577385.1 | lncRNA | downstream | 24816 | 17425604 ~ 17429469 (-) | False | LOC113528975 |
| TU34442 | lncRNA | upstream | 4173 | 17472330 ~ 17529204 (-) | True | si:dkey-44g17.6 |
| TU34457 | lncRNA | upstream | 19204 | 17487361 ~ 17511455 (-) | True | G29196 |
| TU34475 | lncRNA | upstream | 169170 | 17637327 ~ 17638017 (-) | True | G29213 |
| TU34488 | lncRNA | upstream | 232604 | 17700761 ~ 17714365 (-) | True | G29223 |
| TU34503 | lncRNA | upstream | 316318 | 17784475 ~ 17842820 (-) | False | G29237 |
| XM_026917735.2 | mRNA | downstream | 160280 | 17220584 ~ 17294005 (-) | False | pbx1b |
| XM_026917727.2 | mRNA | downstream | 160280 | 17220584 ~ 17294005 (-) | True | pbx1b |
| XM_026930064.2 | mRNA | downstream | 251036 | 17197989 ~ 17203249 (-) | True | LOC113536221 |
| XM_026943221.2 | mRNA | downstream | 262826 | 17186645 ~ 17191459 (-) | True | med8 |
| XM_034313348.1 | mRNA | downstream | 284934 | 17066355 ~ 17169351 (-) | False | szt2 |
| XM_026917852.2 | mRNA | upstream | 5289 | 17473446 ~ 17529301 (-) | False | si:dkey-44g17.6 |
| XM_026917861.2 | mRNA | upstream | 5289 | 17473446 ~ 17529300 (-) | False | si:dkey-44g17.6 |
| XM_026917841.2 | mRNA | upstream | 5289 | 17473446 ~ 17529298 (-) | False | si:dkey-44g17.6 |
| XM_026917804.2 | mRNA | upstream | 62402 | 17530559 ~ 17539905 (-) | True | dr1 |
| XM_034300500.1 | mRNA | upstream | 75519 | 17543676 ~ 17547134 (-) | True | LOC113528309 |
| TU34409 | other | downstream | 174112 | 17272955 ~ 17280173 (-) | True | G29158 |
| TU32920 | other | downstream | 1985056 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU32916 | other | downstream | 1993284 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32819 | other | downstream | 2155266 | 15297309 ~ 15299019 (-) | True | G27843 |
| XR_003403257.2 | other | downstream | 2578295 | 14872949 ~ 14875990 (-) | False | pxmp4 |
| XR_004577384.1 | other | upstream | 45555 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
| TU34529 | other | upstream | 481000 | 17949157 ~ 17949718 (-) | True | G29263 |
| TU34546 | other | upstream | 602830 | 18070987 ~ 18072909 (-) | True | G29279 |
| trnae-cuc_6 | other | upstream | 1109067 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
| TU34886 | other | upstream | 1325875 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
