Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577384.1 |
| length | 618 |
| RNA type | misc_RNA |
| GC content | 0.42 |
| exon number | 3 |
| gene id | si:dkey-44g17.6 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 17472330 ~ 17529315 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34457 | lncRNA | downstream | 2257 | 17487361 ~ 17511455 (-) | True | G29196 |
| TU34432 | lncRNA | downstream | 45555 | 17454285 ~ 17468157 (-) | True | G29176 |
| TU34426 | lncRNA | downstream | 79544 | 17433453 ~ 17434168 (-) | True | G29174 |
| TU34423 | lncRNA | downstream | 83934 | 17423871 ~ 17429778 (-) | True | LOC113528975 |
| XR_003403011.2 | lncRNA | downstream | 84226 | 17425604 ~ 17429486 (-) | False | LOC113528975 |
| TU34475 | lncRNA | upstream | 108012 | 17637327 ~ 17638017 (-) | True | G29213 |
| TU34488 | lncRNA | upstream | 171446 | 17700761 ~ 17714365 (-) | True | G29223 |
| TU34503 | lncRNA | upstream | 255160 | 17784475 ~ 17842820 (-) | False | G29237 |
| TU34502 | lncRNA | upstream | 310247 | 17839562 ~ 17842820 (-) | True | G29237 |
| TU34596 | lncRNA | upstream | 618913 | 18148228 ~ 18148749 (-) | False | zgc:153916 |
| XM_034312419.1 | mRNA | downstream | 51087 | 17438640 ~ 17462625 (-) | True | sec16b |
| XM_026917735.2 | mRNA | downstream | 219707 | 17220584 ~ 17294005 (-) | False | pbx1b |
| XM_026917727.2 | mRNA | downstream | 219707 | 17220584 ~ 17294005 (-) | True | pbx1b |
| XM_026930064.2 | mRNA | downstream | 310463 | 17197989 ~ 17203249 (-) | True | LOC113536221 |
| XM_026943221.2 | mRNA | downstream | 322253 | 17186645 ~ 17191459 (-) | True | med8 |
| XM_026917804.2 | mRNA | upstream | 1244 | 17530559 ~ 17539905 (-) | True | dr1 |
| XM_034300500.1 | mRNA | upstream | 14361 | 17543676 ~ 17547134 (-) | True | LOC113528309 |
| XM_026917713.2 | mRNA | upstream | 21621 | 17550936 ~ 17567323 (-) | True | scinla |
| XM_034298787.1 | mRNA | upstream | 48076 | 17577391 ~ 17579519 (-) | True | si:ch73-389b16.1 |
| XM_034313144.1 | mRNA | upstream | 54336 | 17583651 ~ 17614589 (-) | False | btbd8 |
| TU34409 | other | downstream | 233539 | 17272955 ~ 17280173 (-) | True | G29158 |
| TU32920 | other | downstream | 2044483 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU32916 | other | downstream | 2052711 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32819 | other | downstream | 2214693 | 15297309 ~ 15299019 (-) | True | G27843 |
| XR_003403256.2 | other | downstream | 2637722 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| TU34529 | other | upstream | 419842 | 17949157 ~ 17949718 (-) | True | G29263 |
| TU34546 | other | upstream | 541672 | 18070987 ~ 18072909 (-) | True | G29279 |
| trnae-cuc_6 | other | upstream | 1047909 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
| TU34886 | other | upstream | 1264717 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
| trnag-ucc | other | upstream | 1286944 | 18816259 ~ 18816330 (-) | True | trnag-ucc |
