Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU34829 |
| length | 368 |
| lncRNA type | inter_gene |
| GC content | 0.27 |
| exon number | 1 |
| gene id | G29541 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 18614357 ~ 18614724 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34718 | lncRNA | downstream | 161381 | 18452468 ~ 18452976 (-) | True | G29439 |
| TU34596 | lncRNA | downstream | 465608 | 18148228 ~ 18148749 (-) | False | zgc:153916 |
| TU34503 | lncRNA | downstream | 771537 | 17784475 ~ 17842820 (-) | False | G29237 |
| TU34502 | lncRNA | downstream | 771537 | 17839562 ~ 17842820 (-) | True | G29237 |
| TU34488 | lncRNA | downstream | 899992 | 17700761 ~ 17714365 (-) | True | G29223 |
| TU34830 | lncRNA | upstream | 145 | 18614869 ~ 18615874 (-) | True | G29542 |
| TU34839 | lncRNA | upstream | 19354 | 18634078 ~ 18634357 (-) | True | G29551 |
| XR_004579394.1 | lncRNA | upstream | 179301 | 18794025 ~ 18816812 (-) | True | LOC113537624 |
| XR_004579395.1 | lncRNA | upstream | 179301 | 18794025 ~ 18807890 (-) | False | LOC113537624 |
| XR_003403788.2 | lncRNA | upstream | 179301 | 18794025 ~ 18806448 (-) | False | LOC113537624 |
| XM_026916472.2 | mRNA | downstream | 28131 | 18502917 ~ 18586226 (-) | False | hs2st1b |
| XM_026916382.2 | mRNA | downstream | 28595 | 18501538 ~ 18585762 (-) | True | hs2st1b |
| XM_026920882.2 | mRNA | downstream | 149786 | 18449257 ~ 18464571 (-) | False | lmo4b |
| XM_026920872.2 | mRNA | downstream | 149786 | 18449257 ~ 18464571 (-) | True | lmo4b |
| XM_026917991.2 | mRNA | downstream | 418729 | 18148285 ~ 18195628 (-) | True | zgc:153916 |
| XM_026927315.2 | mRNA | upstream | 1253 | 18615977 ~ 18623608 (-) | True | LOC113534471 |
| XM_026912723.2 | mRNA | upstream | 73874 | 18688598 ~ 18691082 (-) | True | sox14 |
| XM_034312132.1 | mRNA | upstream | 205333 | 18820057 ~ 18835789 (-) | True | hdlbpa |
| XM_026927091.2 | mRNA | upstream | 301901 | 18916625 ~ 18927201 (-) | True | stk25a |
| XM_026916714.2 | mRNA | upstream | 343049 | 18957773 ~ 18961671 (-) | True | dtymk |
| trnae-cuc_6 | other | downstream | 37062 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
| TU34546 | other | downstream | 541448 | 18070987 ~ 18072909 (-) | True | G29279 |
| TU34529 | other | downstream | 664639 | 17949157 ~ 17949718 (-) | True | G29263 |
| XR_004577384.1 | other | downstream | 1085042 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
| TU34409 | other | downstream | 1334184 | 17272955 ~ 17280173 (-) | True | G29158 |
| TU34886 | other | upstream | 179308 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
| trnag-ucc | other | upstream | 201535 | 18816259 ~ 18816330 (-) | True | trnag-ucc |
| trnap-ugg | other | upstream | 202403 | 18817127 ~ 18817198 (-) | True | trnap-ugg |
| trnap-ugg_1 | other | upstream | 765717 | 19380441 ~ 19380512 (-) | True | trnap-ugg_1 |
| trnap-cgg_1 | other | upstream | 771718 | 19386442 ~ 19386513 (-) | True | trnap-cgg_1 |
