Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU35496 |
| length | 250 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G30072 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 19566751 ~ 19567000 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU35495 | lncRNA | downstream | 16 | 19566531 ~ 19566735 (-) | True | G30071 |
| TU35494 | lncRNA | downstream | 240 | 19566283 ~ 19566511 (-) | True | G30070 |
| TU35476 | lncRNA | downstream | 10989 | 19553178 ~ 19555762 (-) | True | G30059 |
| TU35482 | lncRNA | downstream | 26697 | 19537921 ~ 19540054 (-) | True | G30062 |
| TU35304 | lncRNA | downstream | 162130 | 19404408 ~ 19404621 (-) | True | G29905 |
| TU35509 | lncRNA | upstream | 16663 | 19583663 ~ 19584005 (-) | True | G30085 |
| TU35516 | lncRNA | upstream | 32498 | 19599498 ~ 19613602 (-) | True | G30088 |
| TU35691 | lncRNA | upstream | 318468 | 19885468 ~ 19886738 (-) | True | G30236 |
| TU35701 | lncRNA | upstream | 346653 | 19913653 ~ 19913951 (-) | True | G30246 |
| TU35712 | lncRNA | upstream | 356763 | 19923763 ~ 19923979 (-) | True | G30255 |
| XM_026923318.2 | mRNA | downstream | 14058 | 19544152 ~ 19552693 (-) | False | bcl6aa |
| XM_026923309.2 | mRNA | downstream | 14058 | 19544152 ~ 19552693 (-) | True | bcl6aa |
| XM_026924570.2 | mRNA | downstream | 190587 | 19372430 ~ 19376164 (-) | True | im:7152348 |
| XM_034310948.1 | mRNA | downstream | 589822 | 18970308 ~ 18976929 (-) | False | zgc:103559 |
| XM_026918863.2 | mRNA | upstream | 389717 | 19956717 ~ 19983297 (-) | False | tbc1d23 |
| XM_026918854.2 | mRNA | upstream | 389717 | 19956717 ~ 19983297 (-) | True | tbc1d23 |
| XM_026921581.2 | mRNA | upstream | 419024 | 19986024 ~ 19999160 (-) | True | tomm70a |
| XM_026912656.2 | mRNA | upstream | 436359 | 20003359 ~ 20014094 (-) | True | glmnb |
| XM_034314524.1 | mRNA | upstream | 458854 | 20025854 ~ 20032781 (-) | True | gfi1ab |
| trnap-cgg_1 | other | downstream | 180238 | 19386442 ~ 19386513 (-) | True | trnap-cgg_1 |
| trnap-ugg_1 | other | downstream | 186239 | 19380441 ~ 19380512 (-) | True | trnap-ugg_1 |
| trnap-ugg | other | downstream | 749553 | 18817127 ~ 18817198 (-) | True | trnap-ugg |
| trnag-ucc | other | downstream | 750421 | 18816259 ~ 18816330 (-) | True | trnag-ucc |
| TU34886 | other | downstream | 760001 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
| XR_004580158.1 | other | upstream | 1896861 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580163.1 | other | upstream | 1896861 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580160.1 | other | upstream | 1896861 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580156.1 | other | upstream | 1896861 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580159.1 | other | upstream | 1896861 | 21463861 ~ 21531428 (-) | False | raver2 |
