Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU37132 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G31481 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 21532248 ~ 21532459 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37101 | lncRNA | downstream | 120075 | 21389477 ~ 21412173 (-) | True | G31454 |
| TU36922 | lncRNA | downstream | 146972 | 21384409 ~ 21385276 (-) | True | G31298 |
| TU36880 | lncRNA | downstream | 249023 | 21281364 ~ 21283225 (-) | False | lepr |
| TU36702 | lncRNA | downstream | 466510 | 21062894 ~ 21065738 (-) | True | G31094 |
| TU36669 | lncRNA | downstream | 571857 | 20960172 ~ 20960391 (-) | True | G31070 |
| TU37138 | lncRNA | upstream | 37397 | 21569856 ~ 21612822 (-) | True | G31486 |
| TU37141 | lncRNA | upstream | 70085 | 21602544 ~ 21603863 (-) | True | G31489 |
| TU37143 | lncRNA | upstream | 74937 | 21607396 ~ 21609167 (-) | True | G31491 |
| TU37144 | lncRNA | upstream | 82862 | 21615321 ~ 21615675 (-) | True | G31492 |
| TU37369 | lncRNA | upstream | 571739 | 22104198 ~ 22104411 (-) | True | G31681 |
| XM_026919886.2 | mRNA | downstream | 821 | 21449546 ~ 21531427 (-) | True | raver2 |
| XM_026930493.2 | mRNA | downstream | 131320 | 21386910 ~ 21400928 (-) | True | ak4 |
| XM_026930484.2 | mRNA | downstream | 131321 | 21386910 ~ 21400927 (-) | False | ak4 |
| XM_026930465.2 | mRNA | downstream | 153474 | 21342709 ~ 21378774 (-) | False | dnajc6 |
| XM_026930457.2 | mRNA | downstream | 153474 | 21342709 ~ 21378774 (-) | True | dnajc6 |
| XM_034298204.1 | mRNA | upstream | 6540 | 21538999 ~ 21579079 (-) | True | cachd1 |
| XM_026922851.2 | mRNA | upstream | 102108 | 21634567 ~ 21756087 (-) | True | ror1 |
| XM_026928315.2 | mRNA | upstream | 232456 | 21764915 ~ 21777950 (-) | True | pgm1 |
| XM_026921318.2 | mRNA | upstream | 264101 | 21796560 ~ 21815679 (-) | True | alg6 |
| XM_026923416.2 | mRNA | upstream | 290283 | 21822742 ~ 21825474 (-) | True | foxd3 |
| XR_004580158.1 | other | downstream | 820 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580163.1 | other | downstream | 820 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580160.1 | other | downstream | 820 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580156.1 | other | downstream | 820 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580159.1 | other | downstream | 820 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_003403848.2 | other | upstream | 2083698 | 23616157 ~ 23632013 (-) | False | uap1 |
| XR_004577321.1 | other | upstream | 4368271 | 25900730 ~ 25907994 (-) | False | LOC113538393 |
| XR_003403851.2 | other | upstream | 4548690 | 26081149 ~ 26105456 (-) | False | slc19a1 |
| TU39875 | other | upstream | 5098370 | 26630829 ~ 26638504 (-) | True | ecrg4b |
| TU39865 | other | upstream | 5107374 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
