Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU37680 |
| length | 973 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | gpbp1l1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 22582303 ~ 22593861 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37658 | lncRNA | downstream | 4513 | 22577631 ~ 22577835 (-) | False | ccdc17 |
| TU37647 | lncRNA | downstream | 13512 | 22565292 ~ 22568836 (-) | True | G31934 |
| TU37648 | lncRNA | downstream | 13512 | 22565292 ~ 22568836 (-) | False | G31934 |
| TU37625 | lncRNA | downstream | 21740 | 22538323 ~ 22560608 (-) | True | G31916 |
| TU37446 | lncRNA | downstream | 266342 | 22315806 ~ 22316006 (-) | True | G31755 |
| TU37952 | lncRNA | upstream | 126023 | 22711213 ~ 22785690 (-) | True | G32157 |
| XR_003403825.2 | lncRNA | upstream | 405257 | 22990447 ~ 22995189 (-) | True | LOC113538262 |
| TU38041 | lncRNA | upstream | 457341 | 23042531 ~ 23042762 (-) | True | G32244 |
| TU38121 | lncRNA | upstream | 639892 | 23225082 ~ 23225389 (-) | False | dmrt2b |
| TU38487 | lncRNA | upstream | 1093592 | 23678782 ~ 23683686 (-) | True | G32629 |
| XM_026933625.2 | mRNA | downstream | 405 | 22572432 ~ 22581943 (-) | True | ccdc17 |
| XM_034300001.1 | mRNA | downstream | 30049 | 22547254 ~ 22552299 (-) | True | LOC113538473 |
| XM_034300010.1 | mRNA | downstream | 30121 | 22547254 ~ 22552227 (-) | False | LOC113538473 |
| XM_034300006.1 | mRNA | downstream | 30235 | 22547254 ~ 22552113 (-) | False | LOC113538473 |
| XM_026933565.2 | mRNA | downstream | 31023 | 22547254 ~ 22551325 (-) | False | LOC113538473 |
| XM_034312142.1 | mRNA | upstream | 187936 | 22773126 ~ 22964855 (-) | False | pik3r3b |
| XM_034312138.1 | mRNA | upstream | 187936 | 22773126 ~ 22964855 (-) | False | pik3r3b |
| XM_026933188.2 | mRNA | upstream | 187936 | 22773126 ~ 22964855 (-) | True | pik3r3b |
| XM_026933189.2 | mRNA | upstream | 187936 | 22773126 ~ 22793323 (-) | False | pik3r3b |
| XM_026933190.2 | mRNA | upstream | 187936 | 22773126 ~ 22792974 (-) | False | pik3r3b |
| XR_004580163.1 | other | downstream | 1050920 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_003403848.2 | other | upstream | 1030967 | 23616157 ~ 23632013 (-) | False | uap1 |
| XR_004577321.1 | other | upstream | 3315540 | 25900730 ~ 25907994 (-) | False | LOC113538393 |
| XR_003403851.2 | other | upstream | 3495959 | 26081149 ~ 26105456 (-) | False | slc19a1 |
| TU39875 | other | upstream | 4045639 | 26630829 ~ 26638504 (-) | True | ecrg4b |
| TU39865 | other | upstream | 4054643 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
