Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026930138.2 |
| length | 1093 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 9 |
| gene id | tnni1b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 9743031 ~ 9749764 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005861 | troponin complex | cellular_component |
| id | description |
|---|---|
| K10371 | TNNI1; troponin I, slow skeletal muscle |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28757 | lncRNA | downstream | 67292 | 9675522 ~ 9675739 (-) | True | G24268 |
| TU28748 | lncRNA | downstream | 106512 | 9635854 ~ 9636519 (-) | True | G24260 |
| XR_004577035.1 | lncRNA | downstream | 122072 | 9615587 ~ 9620959 (-) | False | LOC113532556 |
| TU28742 | lncRNA | downstream | 123937 | 9615754 ~ 9619094 (-) | True | LOC113532556 |
| XR_003403358.2 | lncRNA | downstream | 127448 | 9612390 ~ 9615583 (-) | True | LOC113532571 |
| TU29081 | lncRNA | upstream | 113603 | 9863367 ~ 9868278 (-) | True | G24516 |
| TU29083 | lncRNA | upstream | 113603 | 9863367 ~ 9868278 (-) | False | G24516 |
| TU29143 | lncRNA | upstream | 188492 | 9938256 ~ 9939043 (-) | True | G24572 |
| TU29184 | lncRNA | upstream | 402053 | 10151817 ~ 10152165 (-) | True | G24611 |
| TU29190 | lncRNA | upstream | 411268 | 10161032 ~ 10161241 (-) | True | G24617 |
| XM_034312340.1 | mRNA | downstream | 16980 | 9715516 ~ 9726051 (-) | False | tnnt2b |
| XM_026913751.2 | mRNA | downstream | 16981 | 9715516 ~ 9726050 (-) | True | tnnt2b |
| XM_026913744.2 | mRNA | downstream | 16984 | 9715516 ~ 9726047 (-) | False | tnnt2b |
| XM_026913735.2 | mRNA | downstream | 16985 | 9715516 ~ 9726046 (-) | False | tnnt2b |
| XM_026922310.2 | mRNA | downstream | 155713 | 9583921 ~ 9587318 (-) | True | sys1 |
| XM_026921922.2 | mRNA | upstream | 2857 | 9752621 ~ 9756596 (-) | True | csrp1b |
| XM_026920191.2 | mRNA | upstream | 192291 | 9942055 ~ 9954145 (-) | True | LOC113530316 |
| XM_026920200.2 | mRNA | upstream | 192291 | 9942055 ~ 9954144 (-) | False | LOC113530316 |
| XM_026922415.2 | mRNA | upstream | 229109 | 9978873 ~ 9982851 (-) | False | ube2c |
| XM_034310863.1 | mRNA | upstream | 229109 | 9978873 ~ 9982280 (-) | True | ube2c |
| TU28828 | other | downstream | 24061 | 9715527 ~ 9718970 (-) | False | tnnt2b |
| TU28673 | other | downstream | 301221 | 9435563 ~ 9441810 (-) | False | tusc2a |
| TU28035 | other | downstream | 1258850 | 8481051 ~ 8484181 (-) | False | tcta |
| TU28036 | other | downstream | 1258917 | 8481051 ~ 8484114 (-) | False | tcta |
| TU28034 | other | downstream | 1259002 | 8481051 ~ 8484029 (-) | False | tcta |
| TU29080 | other | upstream | 113603 | 9863367 ~ 9868278 (-) | False | G24516 |
| TU29342 | other | upstream | 739529 | 10489293 ~ 10490295 (-) | True | G24760 |
| XR_003403751.2 | other | upstream | 3488940 | 13238704 ~ 13238806 (-) | True | LOC113537313 |
| TU31648 | other | upstream | 3748841 | 13498605 ~ 13499984 (-) | False | slc5a8l |
| TU31814 | other | upstream | 3882498 | 13632262 ~ 13634652 (-) | False | rps26l |
