Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403357.2 |
| length | 367 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 4 |
| gene id | LOC113532565 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 9594496 ~ 9596485 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28667 | lncRNA | downstream | 184226 | 9409908 ~ 9410303 (-) | True | G24185 |
| XR_003402903.1 | lncRNA | downstream | 259202 | 9334668 ~ 9335327 (-) | True | LOC113527743 |
| TU28543 | lncRNA | downstream | 263701 | 9330480 ~ 9330828 (-) | True | G24087 |
| TU28529 | lncRNA | downstream | 307874 | 9279922 ~ 9286655 (-) | True | G24073 |
| TU28447 | lncRNA | downstream | 523760 | 9070406 ~ 9070769 (-) | True | G23991 |
| TU28740 | lncRNA | upstream | 15895 | 9612380 ~ 9612649 (-) | False | LOC113532571 |
| XR_003403358.2 | lncRNA | upstream | 15905 | 9612390 ~ 9615583 (-) | True | LOC113532571 |
| XR_004577035.1 | lncRNA | upstream | 19102 | 9615587 ~ 9620959 (-) | False | LOC113532556 |
| TU28742 | lncRNA | upstream | 19269 | 9615754 ~ 9619094 (-) | True | LOC113532556 |
| TU28748 | lncRNA | upstream | 39369 | 9635854 ~ 9636519 (-) | True | G24260 |
| XM_026922310.2 | mRNA | downstream | 7211 | 9583921 ~ 9587318 (-) | True | sys1 |
| XM_026941321.2 | mRNA | downstream | 17541 | 9570763 ~ 9576988 (-) | True | snrpc |
| XM_026919948.2 | mRNA | downstream | 57625 | 9519378 ~ 9536904 (-) | True | ilrun |
| XM_026919936.2 | mRNA | downstream | 84765 | 9500833 ~ 9509764 (-) | True | LOC113530144 |
| XM_026932014.2 | mRNA | downstream | 123173 | 9468540 ~ 9471356 (-) | True | rps10 |
| XM_034312340.1 | mRNA | upstream | 119031 | 9715516 ~ 9726051 (-) | False | tnnt2b |
| XM_026913751.2 | mRNA | upstream | 119031 | 9715516 ~ 9726050 (-) | True | tnnt2b |
| XM_026913744.2 | mRNA | upstream | 119031 | 9715516 ~ 9726047 (-) | False | tnnt2b |
| XM_026913735.2 | mRNA | upstream | 119031 | 9715516 ~ 9726046 (-) | False | tnnt2b |
| XM_026930147.2 | mRNA | upstream | 146546 | 9743031 ~ 9749764 (-) | False | tnni1b |
| TU28673 | other | downstream | 152719 | 9435563 ~ 9441810 (-) | False | tusc2a |
| TU28035 | other | downstream | 1110348 | 8481051 ~ 8484181 (-) | False | tcta |
| TU28036 | other | downstream | 1110415 | 8481051 ~ 8484114 (-) | False | tcta |
| TU28034 | other | downstream | 1110500 | 8481051 ~ 8484029 (-) | False | tcta |
| XR_004580309.1 | other | downstream | 1329300 | 8262619 ~ 8265229 (-) | False | mitfa |
| TU28828 | other | upstream | 119042 | 9715527 ~ 9718970 (-) | False | tnnt2b |
| TU29080 | other | upstream | 266882 | 9863367 ~ 9868278 (-) | False | G24516 |
| TU29342 | other | upstream | 892808 | 10489293 ~ 10490295 (-) | True | G24760 |
| XR_003403751.2 | other | upstream | 3642219 | 13238704 ~ 13238806 (-) | True | LOC113537313 |
| TU31648 | other | upstream | 3902120 | 13498605 ~ 13499984 (-) | False | slc5a8l |
