Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403751.2 |
| length | 103 |
| RNA type | ncRNA |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC113537313 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 13238704 ~ 13238806 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU31421 | lncRNA | downstream | 62545 | 13175077 ~ 13176159 (-) | True | G26613 |
| TU31418 | lncRNA | downstream | 69042 | 13169253 ~ 13169662 (-) | True | G26610 |
| TU31379 | lncRNA | downstream | 132618 | 13104457 ~ 13106086 (-) | True | G26585 |
| TU31363 | lncRNA | downstream | 167881 | 13070595 ~ 13070823 (-) | True | G26570 |
| TU31148 | lncRNA | downstream | 437471 | 12801007 ~ 12801233 (-) | True | G26387 |
| TU31647 | lncRNA | upstream | 254706 | 13493512 ~ 13495861 (-) | False | slc5a8l |
| TU31618 | lncRNA | upstream | 271570 | 13510376 ~ 13568936 (-) | True | G26788 |
| TU31828 | lncRNA | upstream | 402358 | 13641164 ~ 13646894 (-) | False | fkbp11 |
| TU31831 | lncRNA | upstream | 408641 | 13647447 ~ 13694820 (-) | False | G26970 |
| TU31830 | lncRNA | upstream | 416666 | 13655472 ~ 13694820 (-) | True | G26970 |
| XM_026922711.2 | mRNA | downstream | 6964 | 13214941 ~ 13231740 (-) | True | rhoca |
| XM_026927218.2 | mRNA | downstream | 49155 | 13177828 ~ 13189549 (-) | True | capza1a |
| XM_026927351.2 | mRNA | downstream | 65034 | 13161489 ~ 13173670 (-) | True | st7l |
| XM_026916743.2 | mRNA | downstream | 179937 | 13042395 ~ 13058767 (-) | True | slc2a1b |
| XM_034310908.1 | mRNA | downstream | 207659 | 12949685 ~ 13031045 (-) | False | si:dkey-166d12.2 |
| XM_026926108.2 | mRNA | upstream | 251388 | 13490194 ~ 13493259 (-) | False | si:ch211-105j21.9 |
| XM_026926098.2 | mRNA | upstream | 251388 | 13490194 ~ 13493259 (-) | True | si:ch211-105j21.9 |
| XM_026921607.2 | mRNA | upstream | 254706 | 13493512 ~ 13502170 (-) | True | slc5a8l |
| XM_026914240.2 | mRNA | upstream | 277374 | 13516180 ~ 13530635 (-) | True | tspan2a |
| XM_034298028.1 | mRNA | upstream | 294175 | 13532981 ~ 13544134 (-) | False | ngfb |
| TU29342 | other | downstream | 2748409 | 10489293 ~ 10490295 (-) | True | G24760 |
| TU29080 | other | downstream | 3370426 | 9863367 ~ 9868278 (-) | False | G24516 |
| TU28828 | other | downstream | 3519734 | 9715527 ~ 9718970 (-) | False | tnnt2b |
| TU28673 | other | downstream | 3796894 | 9435563 ~ 9441810 (-) | False | tusc2a |
| TU28035 | other | downstream | 4754523 | 8481051 ~ 8484181 (-) | False | tcta |
| TU31648 | other | upstream | 259799 | 13498605 ~ 13499984 (-) | False | slc5a8l |
| TU31814 | other | upstream | 393456 | 13632262 ~ 13634652 (-) | False | rps26l |
| XR_004579719.1 | other | upstream | 634908 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU31994 | other | upstream | 811595 | 14050401 ~ 14058445 (-) | True | G27107 |
| trnae-cuc_5 | other | upstream | 1153474 | 14392280 ~ 14392351 (-) | True | trnae-cuc_5 |
