Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU324237 |
| length | 583 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G273644 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 23047921 ~ 23062345 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU324287 | lncRNA | upstream | 9305 | 23037409 ~ 23038616 (+) | True | G273683 |
| XR_004579839.1 | lncRNA | upstream | 53124 | 22992542 ~ 22994797 (+) | True | LOC117599377 |
| TU324282 | lncRNA | upstream | 53411 | 22992556 ~ 22994510 (+) | False | LOC117599377 |
| TU324179 | lncRNA | upstream | 207801 | 22801081 ~ 22840120 (+) | True | G273600 |
| TU324041 | lncRNA | upstream | 485596 | 22562104 ~ 22562325 (+) | True | G273473 |
| XR_004579810.1 | lncRNA | downstream | 6592 | 23068937 ~ 23073938 (+) | True | LOC117599346 |
| TU324327 | lncRNA | downstream | 73234 | 23135579 ~ 23135832 (+) | True | G273719 |
| TU324488 | lncRNA | downstream | 198701 | 23261046 ~ 23279789 (+) | False | G273865 |
| TU324489 | lncRNA | downstream | 207803 | 23270148 ~ 23279789 (+) | True | G273865 |
| TU324487 | lncRNA | downstream | 212477 | 23274822 ~ 23277850 (+) | False | G273865 |
| XM_026942730.2 | mRNA | upstream | 2843 | 23040466 ~ 23045078 (+) | True | paqr3b |
| XM_026942766.2 | mRNA | upstream | 8372 | 23019928 ~ 23039549 (+) | True | antxr2b |
| XM_026942840.2 | mRNA | upstream | 31695 | 23005005 ~ 23016226 (+) | True | rasgef1bb |
| XM_026942841.2 | mRNA | upstream | 32693 | 23005004 ~ 23015228 (+) | False | rasgef1bb |
| XM_026942550.2 | mRNA | upstream | 90320 | 22948893 ~ 22957601 (+) | True | snx18b |
| XM_026942706.2 | mRNA | downstream | 42332 | 23104677 ~ 23121707 (+) | True | rbm18 |
| XM_026942809.2 | mRNA | downstream | 63007 | 23125352 ~ 23145567 (+) | False | lhx6 |
| XM_026942810.2 | mRNA | downstream | 63007 | 23125352 ~ 23145567 (+) | False | lhx6 |
| XM_026942812.2 | mRNA | downstream | 63924 | 23126269 ~ 23145567 (+) | True | lhx6 |
| XM_026942850.2 | mRNA | downstream | 101364 | 23163709 ~ 23169517 (+) | True | ndufa8 |
| XR_003404475.2 | other | upstream | 382351 | 22622428 ~ 22665570 (+) | True | lrrtm4l1 |
| TU323909 | other | upstream | 673046 | 22369274 ~ 22374875 (+) | False | tmem230a |
| TU323423 | other | upstream | 1569041 | 21476112 ~ 21478880 (+) | True | LOC113543995 |
| TU322810 | other | upstream | 2504967 | 20540325 ~ 20542954 (+) | True | G272408 |
| TU322768 | other | upstream | 2618778 | 20423399 ~ 20429143 (+) | True | G272374 |
| TU324289 | other | downstream | 63022 | 23125367 ~ 23129320 (+) | False | lhx6 |
| TU324492 | other | downstream | 203108 | 23265453 ~ 23274170 (+) | False | rc3h2 |
| TU324491 | other | downstream | 259226 | 23321571 ~ 23360503 (+) | False | LOC113543986 |
| TU324879 | other | downstream | 1040744 | 24103089 ~ 24104595 (+) | False | hsdl2 |
| TU325154 | other | downstream | 1165036 | 24227381 ~ 24228678 (+) | False | LOC117599389 |
