Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU399424 |
| length | 262 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G337195 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 3033844 ~ 3034394 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU399423 | lncRNA | upstream | 14434 | 3019110 ~ 3019410 (+) | True | G337194 |
| XR_003404701.2 | lncRNA | upstream | 38573 | 2926524 ~ 2995271 (+) | True | LOC113546290 |
| TU399362 | lncRNA | upstream | 162935 | 2870683 ~ 2870909 (+) | True | G337138 |
| TU399360 | lncRNA | upstream | 170876 | 2862527 ~ 2862968 (+) | True | G337136 |
| TU399353 | lncRNA | upstream | 190969 | 2842664 ~ 2842875 (+) | True | G337129 |
| TU399433 | lncRNA | downstream | 61603 | 3095997 ~ 3102191 (+) | True | G337197 |
| TU399479 | lncRNA | downstream | 178117 | 3212511 ~ 3299308 (+) | True | G337233 |
| TU399552 | lncRNA | downstream | 455459 | 3489853 ~ 3491029 (+) | True | G337304 |
| TU399520 | lncRNA | downstream | 676308 | 3710702 ~ 3712919 (+) | True | G337273 |
| TU399623 | lncRNA | downstream | 708743 | 3743137 ~ 3745935 (+) | True | G337374 |
| XM_034298751.1 | mRNA | upstream | 10258 | 2995277 ~ 3023586 (+) | True | hdac5 |
| XM_026946102.2 | mRNA | upstream | 143701 | 2845407 ~ 2890143 (+) | True | tanc2a |
| XM_026946022.2 | mRNA | upstream | 292250 | 2671258 ~ 2741594 (+) | True | wnk4b |
| XM_034298398.1 | mRNA | upstream | 373566 | 2607346 ~ 2660278 (+) | False | arhgap27l |
| XM_034298407.1 | mRNA | downstream | 6974 | 3041368 ~ 3067972 (+) | True | vwa3a |
| XM_034298408.1 | mRNA | downstream | 6974 | 3041368 ~ 3067972 (+) | False | vwa3a |
| XM_034298410.1 | mRNA | downstream | 6974 | 3041368 ~ 3063913 (+) | False | vwa3a |
| XM_034298409.1 | mRNA | downstream | 9300 | 3043694 ~ 3067972 (+) | False | vwa3a |
| XM_026945985.2 | mRNA | downstream | 37506 | 3071900 ~ 3091878 (+) | True | sdr42e2 |
| XR_004577078.1 | other | upstream | 641366 | 2358128 ~ 2392478 (+) | False | LOC113546300 |
| XR_004577077.1 | other | upstream | 641372 | 2358128 ~ 2392472 (+) | True | LOC113546300 |
| XR_004577079.1 | other | upstream | 641469 | 2358128 ~ 2392375 (+) | False | LOC113546300 |
| TU399163 | other | upstream | 663768 | 2358116 ~ 2370076 (+) | False | LOC113546300 |
| TU399169 | other | upstream | 712427 | 2317025 ~ 2321417 (+) | False | LOC113546301 |
| TU400576 | other | downstream | 1318128 | 4352522 ~ 4355029 (+) | True | G338163 |
| TU401842 | other | downstream | 3305113 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU401948 | other | downstream | 3570263 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401977 | other | downstream | 3676621 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU403100 | other | downstream | 5248566 | 8282960 ~ 8285204 (+) | True | G340208 |
