Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU399479 |
| length | 609 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G337233 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 3212511 ~ 3299308 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU399433 | lncRNA | upstream | 110320 | 3095997 ~ 3102191 (+) | True | G337197 |
| TU399424 | lncRNA | upstream | 178117 | 3033844 ~ 3034394 (+) | True | G337195 |
| TU399423 | lncRNA | upstream | 193101 | 3019110 ~ 3019410 (+) | True | G337194 |
| XR_003404701.2 | lncRNA | upstream | 217240 | 2926524 ~ 2995271 (+) | True | LOC113546290 |
| TU399362 | lncRNA | upstream | 341602 | 2870683 ~ 2870909 (+) | True | G337138 |
| TU399552 | lncRNA | downstream | 190545 | 3489853 ~ 3491029 (+) | True | G337304 |
| TU399520 | lncRNA | downstream | 411394 | 3710702 ~ 3712919 (+) | True | G337273 |
| TU399623 | lncRNA | downstream | 443829 | 3743137 ~ 3745935 (+) | True | G337374 |
| TU399611 | lncRNA | downstream | 460348 | 3759656 ~ 3762176 (+) | True | G337363 |
| XR_003404699.2 | lncRNA | downstream | 470277 | 3769585 ~ 3771026 (+) | True | LOC113546270 |
| XM_034298349.1 | mRNA | upstream | 74538 | 3128704 ~ 3137973 (+) | True | si:ch211-165g14.1 |
| XM_034298622.1 | mRNA | upstream | 84781 | 3112241 ~ 3127730 (+) | False | mfsd13al |
| XM_034298620.1 | mRNA | upstream | 84783 | 3112241 ~ 3127728 (+) | True | mfsd13al |
| XM_034298621.1 | mRNA | upstream | 84783 | 3112241 ~ 3127728 (+) | False | mfsd13al |
| XM_026945985.2 | mRNA | upstream | 120633 | 3071900 ~ 3091878 (+) | True | sdr42e2 |
| XM_026945983.2 | mRNA | downstream | 1859 | 3301167 ~ 3305283 (+) | False | LOC113546219 |
| XM_034298474.1 | mRNA | downstream | 124997 | 3424305 ~ 3635392 (+) | True | adgrl1a |
| XM_034298475.1 | mRNA | downstream | 124997 | 3424305 ~ 3635392 (+) | False | adgrl1a |
| XM_034298476.1 | mRNA | downstream | 124997 | 3424305 ~ 3623699 (+) | False | adgrl1a |
| XM_034298524.1 | mRNA | downstream | 423881 | 3723189 ~ 3732164 (+) | False | tnfsf18 |
| XR_004577078.1 | other | upstream | 820033 | 2358128 ~ 2392478 (+) | False | LOC113546300 |
| XR_004577077.1 | other | upstream | 820039 | 2358128 ~ 2392472 (+) | True | LOC113546300 |
| XR_004577079.1 | other | upstream | 820136 | 2358128 ~ 2392375 (+) | False | LOC113546300 |
| TU399163 | other | upstream | 842435 | 2358116 ~ 2370076 (+) | False | LOC113546300 |
| TU399169 | other | upstream | 891094 | 2317025 ~ 2321417 (+) | False | LOC113546301 |
| TU400576 | other | downstream | 1053214 | 4352522 ~ 4355029 (+) | True | G338163 |
| TU401842 | other | downstream | 3040199 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU401948 | other | downstream | 3305349 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401977 | other | downstream | 3411707 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU403100 | other | downstream | 4983652 | 8282960 ~ 8285204 (+) | True | G340208 |
