Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU400553 |
| length | 328 |
| lncRNA type | sense_over |
| GC content | 0.55 |
| exon number | 3 |
| gene id | rsad1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 4307922 ~ 4325036 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU400503 | lncRNA | upstream | 48095 | 4268246 ~ 4268455 (+) | True | G338116 |
| TU400439 | lncRNA | upstream | 60651 | 4255557 ~ 4255899 (+) | True | G338057 |
| TU399638 | lncRNA | upstream | 273361 | 3995255 ~ 4043189 (+) | False | G337381 |
| TU399637 | lncRNA | upstream | 313938 | 3995255 ~ 4002612 (+) | True | G337381 |
| TU399633 | lncRNA | upstream | 314541 | 3936171 ~ 4002009 (+) | False | G337381 |
| TU400554 | lncRNA | downstream | 6951 | 4326052 ~ 4326495 (+) | True | G338147 |
| TU400579 | lncRNA | downstream | 20103 | 4339204 ~ 4370211 (+) | True | G338164 |
| TU400686 | lncRNA | downstream | 297223 | 4616324 ~ 4620273 (+) | False | pbx4 |
| TU400711 | lncRNA | downstream | 358416 | 4677517 ~ 4679625 (+) | True | G338252 |
| TU400706 | lncRNA | downstream | 379331 | 4698432 ~ 4708744 (+) | True | brd4 |
| XM_026946086.2 | mRNA | upstream | 48371 | 4263839 ~ 4268179 (+) | True | zgc:103625 |
| XM_026946014.2 | mRNA | upstream | 248606 | 4061506 ~ 4067944 (+) | True | LOC113546255 |
| XM_034298498.1 | mRNA | upstream | 268020 | 4039819 ~ 4048530 (+) | True | crb3a |
| XM_026946069.2 | mRNA | upstream | 339684 | 3965381 ~ 3976866 (+) | True | tecra |
| XM_026945927.2 | mRNA | downstream | 11067 | 4330168 ~ 4352491 (+) | True | epn3a |
| XM_026945929.2 | mRNA | downstream | 11067 | 4330168 ~ 4352491 (+) | False | epn3a |
| XM_026945930.2 | mRNA | downstream | 11067 | 4330168 ~ 4352491 (+) | False | epn3a |
| XM_026945931.2 | mRNA | downstream | 11067 | 4330168 ~ 4352491 (+) | False | epn3a |
| XM_026945933.2 | mRNA | downstream | 11067 | 4330168 ~ 4352491 (+) | False | epn3a |
| XR_004577078.1 | other | upstream | 1924072 | 2358128 ~ 2392478 (+) | False | LOC113546300 |
| XR_004577077.1 | other | upstream | 1924078 | 2358128 ~ 2392472 (+) | True | LOC113546300 |
| XR_004577079.1 | other | upstream | 1924175 | 2358128 ~ 2392375 (+) | False | LOC113546300 |
| TU399163 | other | upstream | 1946474 | 2358116 ~ 2370076 (+) | False | LOC113546300 |
| TU399169 | other | upstream | 1995133 | 2317025 ~ 2321417 (+) | False | LOC113546301 |
| TU400576 | other | downstream | 33421 | 4352522 ~ 4355029 (+) | True | G338163 |
| TU401842 | other | downstream | 2020406 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU401948 | other | downstream | 2285556 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401977 | other | downstream | 2391914 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU403100 | other | downstream | 3963859 | 8282960 ~ 8285204 (+) | True | G340208 |
