Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU400554 |
| length | 444 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G338147 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 4326052 ~ 4326495 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU400553 | lncRNA | upstream | 6951 | 4316550 ~ 4319101 (+) | False | rsad1 |
| TU400503 | lncRNA | upstream | 57597 | 4268246 ~ 4268455 (+) | True | G338116 |
| TU400439 | lncRNA | upstream | 70153 | 4255557 ~ 4255899 (+) | True | G338057 |
| TU399638 | lncRNA | upstream | 282863 | 3995255 ~ 4043189 (+) | False | G337381 |
| TU399637 | lncRNA | upstream | 323440 | 3995255 ~ 4002612 (+) | True | G337381 |
| TU400579 | lncRNA | downstream | 12709 | 4339204 ~ 4370211 (+) | True | G338164 |
| TU400686 | lncRNA | downstream | 289829 | 4616324 ~ 4620273 (+) | False | pbx4 |
| TU400711 | lncRNA | downstream | 351022 | 4677517 ~ 4679625 (+) | True | G338252 |
| TU400706 | lncRNA | downstream | 371937 | 4698432 ~ 4708744 (+) | True | brd4 |
| TU400705 | lncRNA | downstream | 391702 | 4718197 ~ 4731105 (+) | True | G338246 |
| XM_034298715.1 | mRNA | upstream | 1016 | 4307922 ~ 4325036 (+) | True | rsad1 |
| XM_026946086.2 | mRNA | upstream | 57873 | 4263839 ~ 4268179 (+) | True | zgc:103625 |
| XM_026946014.2 | mRNA | upstream | 258108 | 4061506 ~ 4067944 (+) | True | LOC113546255 |
| XM_034298498.1 | mRNA | upstream | 277522 | 4039819 ~ 4048530 (+) | True | crb3a |
| XM_026946069.2 | mRNA | upstream | 349186 | 3965381 ~ 3976866 (+) | True | tecra |
| XM_026945927.2 | mRNA | downstream | 3673 | 4330168 ~ 4352491 (+) | True | epn3a |
| XM_026945929.2 | mRNA | downstream | 3673 | 4330168 ~ 4352491 (+) | False | epn3a |
| XM_026945930.2 | mRNA | downstream | 3673 | 4330168 ~ 4352491 (+) | False | epn3a |
| XM_026945931.2 | mRNA | downstream | 3673 | 4330168 ~ 4352491 (+) | False | epn3a |
| XM_026945933.2 | mRNA | downstream | 3673 | 4330168 ~ 4352491 (+) | False | epn3a |
| XR_004577078.1 | other | upstream | 1933574 | 2358128 ~ 2392478 (+) | False | LOC113546300 |
| XR_004577077.1 | other | upstream | 1933580 | 2358128 ~ 2392472 (+) | True | LOC113546300 |
| XR_004577079.1 | other | upstream | 1933677 | 2358128 ~ 2392375 (+) | False | LOC113546300 |
| TU399163 | other | upstream | 1955976 | 2358116 ~ 2370076 (+) | False | LOC113546300 |
| TU399169 | other | upstream | 2004635 | 2317025 ~ 2321417 (+) | False | LOC113546301 |
| TU400576 | other | downstream | 26027 | 4352522 ~ 4355029 (+) | True | G338163 |
| TU401842 | other | downstream | 2013012 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU401948 | other | downstream | 2278162 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401977 | other | downstream | 2384520 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU403100 | other | downstream | 3956465 | 8282960 ~ 8285204 (+) | True | G340208 |
