Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU400698 |
| length | 286 |
| lncRNA type | read_through |
| GC content | 0.34 |
| exon number | 2 |
| gene id | stxbp2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 4761313 ~ 4780386 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU400705 | lncRNA | upstream | 30208 | 4718197 ~ 4731105 (+) | True | G338246 |
| TU400706 | lncRNA | upstream | 52569 | 4698432 ~ 4708744 (+) | True | brd4 |
| TU400711 | lncRNA | upstream | 81688 | 4677517 ~ 4679625 (+) | True | G338252 |
| TU400686 | lncRNA | upstream | 141040 | 4616324 ~ 4620273 (+) | False | pbx4 |
| TU400579 | lncRNA | upstream | 391102 | 4339204 ~ 4370211 (+) | True | G338164 |
| TU401186 | lncRNA | downstream | 460997 | 5241325 ~ 5241584 (+) | True | G338658 |
| XR_004577050.1 | lncRNA | downstream | 596878 | 5377206 ~ 5386152 (+) | True | LOC117595846 |
| TU401215 | lncRNA | downstream | 607660 | 5387988 ~ 5392192 (+) | True | G338683 |
| TU401337 | lncRNA | downstream | 651521 | 5431849 ~ 5432264 (+) | True | G338799 |
| TU401352 | lncRNA | downstream | 744712 | 5525040 ~ 5526609 (+) | True | G338814 |
| XM_026946025.2 | mRNA | upstream | 8644 | 4698257 ~ 4752669 (+) | False | brd4 |
| XM_026946031.2 | mRNA | downstream | 963 | 4781291 ~ 4794558 (+) | True | xab2 |
| XM_026946016.2 | mRNA | downstream | 18013 | 4798341 ~ 4840522 (+) | True | camsap3 |
| XM_026946017.2 | mRNA | downstream | 18013 | 4798341 ~ 4840522 (+) | False | camsap3 |
| XM_034298512.1 | mRNA | downstream | 18363 | 4798691 ~ 4840522 (+) | False | camsap3 |
| XM_034298513.1 | mRNA | downstream | 18363 | 4798691 ~ 4840522 (+) | False | camsap3 |
| TU400576 | other | upstream | 406284 | 4352522 ~ 4355029 (+) | True | G338163 |
| XR_004577078.1 | other | upstream | 2368835 | 2358128 ~ 2392478 (+) | False | LOC113546300 |
| XR_004577077.1 | other | upstream | 2368841 | 2358128 ~ 2392472 (+) | True | LOC113546300 |
| XR_004577079.1 | other | upstream | 2368938 | 2358128 ~ 2392375 (+) | False | LOC113546300 |
| TU399163 | other | upstream | 2391237 | 2358116 ~ 2370076 (+) | False | LOC113546300 |
| TU401842 | other | downstream | 1559179 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU401948 | other | downstream | 1824329 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401977 | other | downstream | 1930687 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU403100 | other | downstream | 3502632 | 8282960 ~ 8285204 (+) | True | G340208 |
| TU403493 | other | downstream | 4132600 | 8912928 ~ 8915844 (+) | True | sem1 |
