Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026945962.2 |
| length | 1098 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 4 |
| gene id | LOC113546199 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 4757814 ~ 4762602 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU400705 | lncRNA | upstream | 26709 | 4718197 ~ 4731105 (+) | True | G338246 |
| TU400706 | lncRNA | upstream | 49070 | 4698432 ~ 4708744 (+) | True | brd4 |
| TU400711 | lncRNA | upstream | 78189 | 4677517 ~ 4679625 (+) | True | G338252 |
| TU400686 | lncRNA | upstream | 137541 | 4616324 ~ 4620273 (+) | False | pbx4 |
| TU400579 | lncRNA | upstream | 387603 | 4339204 ~ 4370211 (+) | True | G338164 |
| TU401186 | lncRNA | downstream | 479091 | 5241325 ~ 5241584 (+) | True | G338658 |
| XR_004577050.1 | lncRNA | downstream | 614972 | 5377206 ~ 5386152 (+) | True | LOC117595846 |
| TU401215 | lncRNA | downstream | 625754 | 5387988 ~ 5392192 (+) | True | G338683 |
| TU401337 | lncRNA | downstream | 669615 | 5431849 ~ 5432264 (+) | True | G338799 |
| TU401352 | lncRNA | downstream | 762806 | 5525040 ~ 5526609 (+) | True | G338814 |
| XM_034298539.1 | mRNA | upstream | 5145 | 4698257 ~ 4752669 (+) | False | brd4 |
| XM_026946025.2 | mRNA | upstream | 5145 | 4698257 ~ 4752669 (+) | False | brd4 |
| XM_034298540.1 | mRNA | upstream | 5145 | 4698492 ~ 4752669 (+) | False | brd4 |
| XM_034298541.1 | mRNA | upstream | 5145 | 4698975 ~ 4752669 (+) | False | brd4 |
| XM_034298542.1 | mRNA | upstream | 5145 | 4717540 ~ 4752669 (+) | False | brd4 |
| XM_026946033.2 | mRNA | downstream | 944 | 4763178 ~ 4780386 (+) | False | stxbp2 |
| XM_026946032.2 | mRNA | downstream | 945 | 4763179 ~ 4780386 (+) | True | stxbp2 |
| XM_026946031.2 | mRNA | downstream | 19057 | 4781291 ~ 4794558 (+) | True | xab2 |
| XM_026946016.2 | mRNA | downstream | 36107 | 4798341 ~ 4840522 (+) | True | camsap3 |
| XM_026946017.2 | mRNA | downstream | 36107 | 4798341 ~ 4840522 (+) | False | camsap3 |
| TU400576 | other | upstream | 402785 | 4352522 ~ 4355029 (+) | True | G338163 |
| XR_004577078.1 | other | upstream | 2365336 | 2358128 ~ 2392478 (+) | False | LOC113546300 |
| XR_004577077.1 | other | upstream | 2365342 | 2358128 ~ 2392472 (+) | True | LOC113546300 |
| XR_004577079.1 | other | upstream | 2365439 | 2358128 ~ 2392375 (+) | False | LOC113546300 |
| TU399163 | other | upstream | 2387738 | 2358116 ~ 2370076 (+) | False | LOC113546300 |
| TU401842 | other | downstream | 1577273 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU401948 | other | downstream | 1842423 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401977 | other | downstream | 1948781 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU403100 | other | downstream | 3520726 | 8282960 ~ 8285204 (+) | True | G340208 |
| TU403493 | other | downstream | 4150694 | 8912928 ~ 8915844 (+) | True | sem1 |
