Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU402366 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G339659 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 7232884 ~ 7233107 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU402316 | lncRNA | upstream | 273600 | 6953062 ~ 6959284 (+) | True | G339618 |
| TU402314 | lncRNA | upstream | 281062 | 6950572 ~ 6951822 (+) | True | G339616 |
| TU401951 | lncRNA | upstream | 581058 | 6648179 ~ 6651826 (+) | True | G339300 |
| TU401938 | lncRNA | upstream | 586929 | 6578803 ~ 6645955 (+) | True | G339290 |
| TU401922 | lncRNA | upstream | 705790 | 6526395 ~ 6527094 (+) | True | G339279 |
| TU402368 | lncRNA | downstream | 14713 | 7247820 ~ 7250415 (+) | True | G339661 |
| TU402412 | lncRNA | downstream | 161967 | 7395074 ~ 7399070 (+) | True | G339700 |
| TU402435 | lncRNA | downstream | 216643 | 7449750 ~ 7467646 (+) | False | G339721 |
| TU402434 | lncRNA | downstream | 216863 | 7449970 ~ 7454829 (+) | True | G339721 |
| TU402542 | lncRNA | downstream | 439873 | 7672980 ~ 7674655 (+) | True | G339804 |
| XM_026930099.2 | mRNA | upstream | 223973 | 6995313 ~ 7008911 (+) | True | cndp2 |
| XM_034298327.1 | mRNA | upstream | 457349 | 6773319 ~ 6775535 (+) | True | LOC113536346 |
| XM_026929412.2 | mRNA | upstream | 566531 | 6664093 ~ 6666353 (+) | True | rplp1 |
| XM_026930046.2 | mRNA | upstream | 570002 | 6653221 ~ 6662882 (+) | False | clptm1l |
| XM_034298549.1 | mRNA | downstream | 2993 | 7236100 ~ 7278140 (+) | True | tshz1 |
| XM_026930080.2 | mRNA | downstream | 241600 | 7474707 ~ 7477662 (+) | True | galr1a |
| XM_026929450.2 | mRNA | downstream | 289823 | 7522930 ~ 7531501 (+) | True | sall3b |
| XM_034298588.1 | mRNA | downstream | 300933 | 7534040 ~ 7580421 (+) | True | atp9b |
| XM_034298589.1 | mRNA | downstream | 300933 | 7534040 ~ 7580421 (+) | False | atp9b |
| TU401977 | other | upstream | 515738 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU401948 | other | upstream | 617012 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401842 | other | upstream | 889013 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU400576 | other | upstream | 2877855 | 4352522 ~ 4355029 (+) | True | G338163 |
| XR_004577079.1 | other | upstream | 4840509 | 2358128 ~ 2392375 (+) | False | LOC113546300 |
| TU403100 | other | downstream | 1049853 | 8282960 ~ 8285204 (+) | True | G340208 |
| TU403493 | other | downstream | 1679821 | 8912928 ~ 8915844 (+) | True | sem1 |
| TU403492 | other | downstream | 1679866 | 8912973 ~ 8915844 (+) | False | sem1 |
| TU403677 | other | downstream | 1991533 | 9224640 ~ 9229436 (+) | False | bet1 |
| TU404551 | other | downstream | 3241376 | 10474483 ~ 10481970 (+) | True | G341451 |
