Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU402787 |
| length | 311 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G339965 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 7888704 ~ 7889014 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU402580 | lncRNA | upstream | 74840 | 7813632 ~ 7813864 (+) | True | G339830 |
| XR_003403651.2 | lncRNA | upstream | 116248 | 7764753 ~ 7772456 (+) | True | LOC113535942 |
| TU402542 | lncRNA | upstream | 214049 | 7672980 ~ 7674655 (+) | True | G339804 |
| TU402435 | lncRNA | upstream | 421058 | 7449750 ~ 7467646 (+) | False | G339721 |
| TU402434 | lncRNA | upstream | 433875 | 7449970 ~ 7454829 (+) | True | G339721 |
| TU402875 | lncRNA | downstream | 109069 | 7998083 ~ 7998288 (+) | True | G340047 |
| TU402884 | lncRNA | downstream | 208155 | 8097169 ~ 8100677 (+) | False | G340056 |
| TU402885 | lncRNA | downstream | 208155 | 8097169 ~ 8100677 (+) | False | G340056 |
| TU402887 | lncRNA | downstream | 208155 | 8097169 ~ 8100677 (+) | True | G340056 |
| TU402890 | lncRNA | downstream | 208155 | 8097169 ~ 8100677 (+) | False | G340056 |
| XM_026930015.2 | mRNA | upstream | 10929 | 7870877 ~ 7877775 (+) | True | trhrb |
| XM_026929554.2 | mRNA | upstream | 224399 | 7655705 ~ 7664305 (+) | True | fbxl6 |
| XM_026929556.2 | mRNA | upstream | 224399 | 7655705 ~ 7664305 (+) | False | fbxl6 |
| XM_026930035.2 | mRNA | upstream | 251733 | 7592626 ~ 7636971 (+) | True | nfatc1 |
| XM_026930036.2 | mRNA | upstream | 251733 | 7592626 ~ 7636971 (+) | False | nfatc1 |
| XM_026929993.2 | mRNA | downstream | 32418 | 7921432 ~ 7971682 (+) | True | pkhd1l1.1 |
| XM_026930071.2 | mRNA | downstream | 84542 | 7973556 ~ 7976616 (+) | True | gdf6b |
| XM_026930044.2 | mRNA | downstream | 131787 | 8020801 ~ 8027977 (+) | False | LOC113536206 |
| XM_034298675.1 | mRNA | downstream | 131787 | 8020801 ~ 8027977 (+) | False | LOC113536206 |
| XM_026930043.2 | mRNA | downstream | 131788 | 8020802 ~ 8028040 (+) | True | LOC113536206 |
| TU401977 | other | upstream | 1171558 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU401948 | other | upstream | 1272832 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401842 | other | upstream | 1544833 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU400576 | other | upstream | 3533675 | 4352522 ~ 4355029 (+) | True | G338163 |
| XR_004577079.1 | other | upstream | 5496329 | 2358128 ~ 2392375 (+) | False | LOC113546300 |
| TU403100 | other | downstream | 393946 | 8282960 ~ 8285204 (+) | True | G340208 |
| TU403493 | other | downstream | 1023914 | 8912928 ~ 8915844 (+) | True | sem1 |
| TU403492 | other | downstream | 1023959 | 8912973 ~ 8915844 (+) | False | sem1 |
| TU403677 | other | downstream | 1335626 | 9224640 ~ 9229436 (+) | False | bet1 |
| TU404551 | other | downstream | 2585469 | 10474483 ~ 10481970 (+) | True | G341451 |
