Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026929428.2 |
| length | 1319 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 2 |
| gene id | smim12 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 11292291 ~ 11294356 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU404547 | lncRNA | upstream | 834163 | 10437404 ~ 10458143 (+) | True | G341449 |
| TU404546 | lncRNA | upstream | 837514 | 10449436 ~ 10454792 (+) | True | LOC113536353 |
| XR_003403676.2 | lncRNA | upstream | 838509 | 10449709 ~ 10453797 (+) | False | LOC113536353 |
| TU404543 | lncRNA | upstream | 840744 | 10450465 ~ 10451562 (+) | True | G341445 |
| XR_004577048.1 | lncRNA | upstream | 844351 | 10446328 ~ 10447955 (+) | True | LOC117595845 |
| TU405048 | lncRNA | downstream | 24696 | 11318755 ~ 11319077 (+) | True | G341894 |
| TU405046 | lncRNA | downstream | 40260 | 11334319 ~ 11336268 (+) | False | dlgap3 |
| TU405043 | lncRNA | downstream | 90977 | 11385036 ~ 11473979 (+) | False | G341890 |
| TU405042 | lncRNA | downstream | 165028 | 11459087 ~ 11473979 (+) | True | G341890 |
| TU405227 | lncRNA | downstream | 289583 | 11583642 ~ 11583855 (+) | True | G342067 |
| XM_026930214.2 | mRNA | upstream | 724 | 11284533 ~ 11291582 (+) | True | pef1 |
| XM_034298839.1 | mRNA | upstream | 9078 | 11275826 ~ 11283228 (+) | True | cx30.9 |
| XM_026930215.2 | mRNA | upstream | 9078 | 11280546 ~ 11283228 (+) | False | cx30.9 |
| XM_026930135.2 | mRNA | upstream | 213869 | 11057105 ~ 11078437 (+) | True | LOC113536281 |
| XM_026929421.2 | mRNA | upstream | 672133 | 10597416 ~ 10620173 (+) | True | angpt2b |
| XM_026930020.2 | mRNA | downstream | 20471 | 11314530 ~ 11467459 (+) | False | dlgap3 |
| XM_034298527.1 | mRNA | downstream | 40269 | 11334328 ~ 11473323 (+) | False | dlgap3 |
| XM_026930021.2 | mRNA | downstream | 40269 | 11334328 ~ 11467459 (+) | False | dlgap3 |
| XM_034298526.1 | mRNA | downstream | 153083 | 11447142 ~ 11473323 (+) | True | dlgap3 |
| XM_026929711.2 | mRNA | downstream | 247444 | 11541503 ~ 11569943 (+) | True | fam49al |
| TU404551 | other | upstream | 810336 | 10474483 ~ 10481970 (+) | True | G341451 |
| TU403677 | other | upstream | 2062870 | 9224640 ~ 9229436 (+) | False | bet1 |
| TU403493 | other | upstream | 2376462 | 8912928 ~ 8915844 (+) | True | sem1 |
| TU403492 | other | upstream | 2376462 | 8912973 ~ 8915844 (+) | False | sem1 |
| TU403100 | other | upstream | 3007102 | 8282960 ~ 8285204 (+) | True | G340208 |
| XR_004577055.1 | other | downstream | 516050 | 11810109 ~ 11815273 (+) | False | sostdc1b |
| TU405918 | other | downstream | 1397966 | 12692025 ~ 12695512 (+) | False | fabp3 |
| XR_003403671.2 | other | downstream | 1491778 | 12785837 ~ 12792473 (+) | True | LOC113536228 |
| XR_004577016.1 | other | downstream | 1610564 | 12904623 ~ 12951963 (+) | False | si:ch211-199g17.2 |
| TU406031 | other | downstream | 1783111 | 13077170 ~ 13081229 (+) | True | G342718 |
