Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU405731 |
| length | 992 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G342496 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 12387784 ~ 12388775 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU405533 | lncRNA | upstream | 111832 | 12275746 ~ 12275952 (+) | True | G342333 |
| TU405392 | lncRNA | upstream | 457727 | 11863246 ~ 11930057 (+) | True | G342208 |
| TU405369 | lncRNA | upstream | 589989 | 11787073 ~ 11797795 (+) | False | G342189 |
| TU405370 | lncRNA | upstream | 595142 | 11787746 ~ 11792642 (+) | True | G342189 |
| TU405371 | lncRNA | upstream | 602804 | 11782266 ~ 11784980 (+) | True | G342190 |
| TU405780 | lncRNA | downstream | 67932 | 12456707 ~ 12460218 (+) | True | G342538 |
| TU405788 | lncRNA | downstream | 85569 | 12474344 ~ 12476263 (+) | True | G342546 |
| TU405838 | lncRNA | downstream | 106267 | 12495042 ~ 12544734 (+) | True | G342589 |
| TU405841 | lncRNA | downstream | 109133 | 12497908 ~ 12498466 (+) | True | G342592 |
| TU405844 | lncRNA | downstream | 114046 | 12502821 ~ 12505195 (+) | True | G342595 |
| XM_026930004.2 | mRNA | upstream | 590 | 12382783 ~ 12387194 (+) | True | anp32e |
| XM_026930182.2 | mRNA | upstream | 40134 | 12340039 ~ 12347650 (+) | True | jtb |
| XM_034298802.1 | mRNA | upstream | 49486 | 12277882 ~ 12338298 (+) | False | LOC113536355 |
| XM_026930066.2 | mRNA | downstream | 40120 | 12428895 ~ 12455857 (+) | True | pogza |
| XM_034298562.1 | mRNA | downstream | 73970 | 12462745 ~ 12472879 (+) | True | si:dkey-166k12.1 |
| XM_026929517.2 | mRNA | downstream | 73996 | 12462771 ~ 12472879 (+) | False | si:dkey-166k12.1 |
| XM_026929465.2 | mRNA | downstream | 118614 | 12507389 ~ 12513161 (+) | True | crtap |
| XM_026929603.2 | mRNA | downstream | 142530 | 12531305 ~ 12554353 (+) | True | fbxl2 |
| XR_004577055.1 | other | upstream | 572511 | 11810109 ~ 11815273 (+) | False | sostdc1b |
| TU405031 | other | upstream | 1093428 | 11292324 ~ 11294356 (+) | True | smim12 |
| TU405030 | other | upstream | 1093754 | 11292324 ~ 11294030 (+) | False | smim12 |
| TU404551 | other | upstream | 1905814 | 10474483 ~ 10481970 (+) | True | G341451 |
| TU403677 | other | upstream | 3158348 | 9224640 ~ 9229436 (+) | False | bet1 |
| TU405918 | other | downstream | 303250 | 12692025 ~ 12695512 (+) | False | fabp3 |
| XR_003403671.2 | other | downstream | 397062 | 12785837 ~ 12792473 (+) | True | LOC113536228 |
| XR_004577016.1 | other | downstream | 515848 | 12904623 ~ 12951963 (+) | False | si:ch211-199g17.2 |
| TU406031 | other | downstream | 688395 | 13077170 ~ 13081229 (+) | True | G342718 |
| TU407134 | other | downstream | 1816961 | 14205736 ~ 14219690 (+) | False | slc30a8 |
