Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026929967.2 |
| length | 1214 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 3 |
| gene id | dlx5a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 8872595 ~ 8874442 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0009612 | response to mechanical stimulus | biological_process |
| GO:0051216 | cartilage development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
| id | description |
|---|---|
| K18489 | DLX5; homeobox protein DLX5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU403270 | lncRNA | upstream | 12932 | 8850968 ~ 8859663 (+) | True | G340339 |
| TU403267 | lncRNA | upstream | 26911 | 8844274 ~ 8845684 (+) | True | G340336 |
| TU403206 | lncRNA | upstream | 203813 | 8668579 ~ 8668782 (+) | True | G340297 |
| TU403162 | lncRNA | upstream | 255554 | 8613486 ~ 8617041 (+) | True | G340257 |
| TU403151 | lncRNA | upstream | 380681 | 8489679 ~ 8491914 (+) | True | G340248 |
| XR_004577075.1 | lncRNA | downstream | 1515 | 8875957 ~ 8891060 (+) | False | LOC117595890 |
| XR_004577073.1 | lncRNA | downstream | 2509 | 8876951 ~ 8891060 (+) | False | LOC117595890 |
| XR_004577074.1 | lncRNA | downstream | 5866 | 8880308 ~ 8891060 (+) | True | LOC117595890 |
| TU403494 | lncRNA | downstream | 42164 | 8916606 ~ 8917800 (+) | True | G340517 |
| XR_004576996.1 | lncRNA | downstream | 88495 | 8962937 ~ 8966727 (+) | True | LOC117595810 |
| XM_026929455.2 | mRNA | upstream | 29477 | 8839251 ~ 8843118 (+) | True | chrac1 |
| XM_026929643.2 | mRNA | upstream | 47770 | 8820384 ~ 8824825 (+) | True | c23h6orf62 |
| XM_026929828.2 | mRNA | upstream | 57626 | 8767996 ~ 8814969 (+) | True | ripor2 |
| XM_026929430.2 | mRNA | downstream | 38538 | 8912980 ~ 8915846 (+) | False | sem1 |
| XM_026930225.2 | mRNA | downstream | 160020 | 9034462 ~ 9053330 (+) | True | pdk4 |
| XM_034298368.1 | mRNA | downstream | 244572 | 9119014 ~ 9133558 (+) | False | sgce |
| XM_026929620.2 | mRNA | downstream | 244573 | 9119015 ~ 9133558 (+) | True | sgce |
| XM_034298369.1 | mRNA | downstream | 244574 | 9119016 ~ 9133558 (+) | False | sgce |
| TU403100 | other | upstream | 587391 | 8282960 ~ 8285204 (+) | True | G340208 |
| TU401977 | other | upstream | 2155449 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU401948 | other | upstream | 2256723 | 6604657 ~ 6615872 (+) | False | mturn |
| TU401842 | other | upstream | 2528724 | 6339507 ~ 6343871 (+) | False | LOC113535938 |
| TU400576 | other | upstream | 4517566 | 4352522 ~ 4355029 (+) | True | G338163 |
| TU403493 | other | downstream | 38486 | 8912928 ~ 8915844 (+) | True | sem1 |
| TU403492 | other | downstream | 38531 | 8912973 ~ 8915844 (+) | False | sem1 |
| TU403677 | other | downstream | 350198 | 9224640 ~ 9229436 (+) | False | bet1 |
| TU404551 | other | downstream | 1600041 | 10474483 ~ 10481970 (+) | True | G341451 |
| TU405030 | other | downstream | 2417882 | 11292324 ~ 11294030 (+) | False | smim12 |
