Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026930073.2 |
| length | 760 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC113536234 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 9804036 ~ 9806104 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU404103 | lncRNA | upstream | 73067 | 9728928 ~ 9730969 (+) | True | G341038 |
| TU404020 | lncRNA | upstream | 134808 | 9627788 ~ 9669228 (+) | True | G340967 |
| TU403973 | lncRNA | upstream | 238510 | 9557697 ~ 9565526 (+) | False | LOC113536134 |
| XR_003403660.2 | lncRNA | upstream | 243663 | 9557738 ~ 9560373 (+) | True | LOC113536134 |
| TU403683 | lncRNA | upstream | 556988 | 9246479 ~ 9247048 (+) | True | G340687 |
| TU404499 | lncRNA | downstream | 387672 | 10193776 ~ 10197002 (+) | True | zgc:91910 |
| TU404568 | lncRNA | downstream | 592106 | 10398210 ~ 10398409 (+) | True | G341468 |
| TU404570 | lncRNA | downstream | 592849 | 10398953 ~ 10399867 (+) | True | G341469 |
| TU404547 | lncRNA | downstream | 631300 | 10437404 ~ 10458143 (+) | True | G341449 |
| XR_004577048.1 | lncRNA | downstream | 640224 | 10446328 ~ 10447955 (+) | True | LOC117595845 |
| XM_026930023.2 | mRNA | upstream | 2952 | 9782215 ~ 9801084 (+) | True | galnt12 |
| XM_026929682.2 | mRNA | upstream | 24325 | 9761655 ~ 9779711 (+) | True | poc1bl |
| XM_026930186.2 | mRNA | upstream | 186011 | 9604471 ~ 9618025 (+) | True | pex1 |
| XM_026930187.2 | mRNA | upstream | 186011 | 9604471 ~ 9618025 (+) | False | pex1 |
| XM_026929443.2 | mRNA | upstream | 203687 | 9597569 ~ 9600349 (+) | True | efcab1 |
| XM_026929439.2 | mRNA | downstream | 16599 | 9822703 ~ 10006532 (+) | True | gabbr2 |
| XM_034298365.1 | mRNA | downstream | 59160 | 9865264 ~ 10006532 (+) | False | gabbr2 |
| XM_026930031.2 | mRNA | downstream | 236320 | 10042424 ~ 10047887 (+) | True | abitram |
| XM_026930122.2 | mRNA | downstream | 341545 | 10147649 ~ 10154191 (+) | True | ccn4a |
| XM_026930175.2 | mRNA | downstream | 381589 | 10187693 ~ 10190316 (+) | True | wdyhv1 |
| TU403677 | other | upstream | 574600 | 9224640 ~ 9229436 (+) | False | bet1 |
| TU403493 | other | upstream | 888192 | 8912928 ~ 8915844 (+) | True | sem1 |
| TU403492 | other | upstream | 888192 | 8912973 ~ 8915844 (+) | False | sem1 |
| TU403100 | other | upstream | 1518832 | 8282960 ~ 8285204 (+) | True | G340208 |
| TU401977 | other | upstream | 3086890 | 6711015 ~ 6717146 (+) | True | G339324 |
| TU404551 | other | downstream | 668379 | 10474483 ~ 10481970 (+) | True | G341451 |
| TU405030 | other | downstream | 1486220 | 11292324 ~ 11294030 (+) | False | smim12 |
| TU405031 | other | downstream | 1486220 | 11292324 ~ 11294356 (+) | True | smim12 |
| XR_004577055.1 | other | downstream | 2004005 | 11810109 ~ 11815273 (+) | False | sostdc1b |
| TU405918 | other | downstream | 2885921 | 12692025 ~ 12695512 (+) | False | fabp3 |
