Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034298554.1 |
| length | 945 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 7 |
| gene id | mrpl24 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 1574337 ~ 1578156 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02895 | RP-L24, MRPL24, rplX; large subunit ribosomal protein L24 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU398216 | lncRNA | upstream | 23137 | 1549855 ~ 1551200 (+) | True | G336267 |
| TU398386 | lncRNA | upstream | 25107 | 1548991 ~ 1549230 (+) | True | G336391 |
| TU398232 | lncRNA | upstream | 25445 | 1548665 ~ 1548892 (+) | True | G336283 |
| XR_004577008.1 | lncRNA | upstream | 75316 | 1494315 ~ 1499021 (+) | True | LOC117595828 |
| TU398350 | lncRNA | upstream | 216748 | 1357324 ~ 1357589 (+) | True | G336364 |
| TU398401 | lncRNA | downstream | 1639 | 1579795 ~ 1580300 (+) | True | G336406 |
| TU398224 | lncRNA | downstream | 8091 | 1586247 ~ 1588294 (+) | True | G336275 |
| TU398446 | lncRNA | downstream | 96901 | 1675057 ~ 1680296 (+) | False | polr2k |
| TU398200 | lncRNA | downstream | 160007 | 1738163 ~ 1741007 (+) | False | G336256 |
| TU398201 | lncRNA | downstream | 160007 | 1738163 ~ 1741007 (+) | True | G336256 |
| XM_034298424.1 | mRNA | upstream | 29806 | 1530514 ~ 1544531 (+) | True | mindy1 |
| XM_034298417.1 | mRNA | upstream | 52587 | 1444122 ~ 1521750 (+) | False | LOC113546241 |
| XM_034298418.1 | mRNA | upstream | 52587 | 1499420 ~ 1521750 (+) | False | LOC113546241 |
| XM_034298420.1 | mRNA | upstream | 83110 | 1471050 ~ 1491227 (+) | True | LOC113546297 |
| XM_026946072.2 | mRNA | upstream | 86080 | 1471050 ~ 1488257 (+) | False | LOC113546297 |
| XM_034298552.1 | mRNA | downstream | 842 | 1578998 ~ 1586462 (+) | True | prcc |
| XM_026946046.2 | mRNA | downstream | 18691 | 1596847 ~ 1608854 (+) | True | lix1l |
| XM_026946045.2 | mRNA | downstream | 32458 | 1610614 ~ 1629996 (+) | True | adck5 |
| XM_026946070.2 | mRNA | downstream | 96884 | 1675040 ~ 1680352 (+) | True | polr2k |
| XM_034298432.1 | mRNA | downstream | 105178 | 1683334 ~ 1701731 (+) | False | spag1a |
| TU398302 | other | upstream | 238807 | 1269809 ~ 1335530 (+) | False | G336334 |
| TU398322 | other | upstream | 246830 | 1325816 ~ 1327507 (+) | True | G336350 |
| TU398245 | other | upstream | 438230 | 1132988 ~ 1136107 (+) | False | mllt11 |
| TU398147 | other | upstream | 598016 | 973669 ~ 976321 (+) | True | G336213 |
| TU398091 | other | upstream | 779642 | 794117 ~ 794695 (+) | True | G336172 |
| TU398432 | other | downstream | 79161 | 1657317 ~ 1659459 (+) | True | G336433 |
| TU398943 | other | downstream | 298118 | 1876274 ~ 1945866 (+) | True | G336822 |
| TU399169 | other | downstream | 738869 | 2317025 ~ 2321417 (+) | False | LOC113546301 |
| TU399163 | other | downstream | 779960 | 2358116 ~ 2370076 (+) | False | LOC113546300 |
| XR_004577078.1 | other | downstream | 779972 | 2358128 ~ 2392478 (+) | False | LOC113546300 |
