Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034298749.1 |
| length | 925 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 6 |
| gene id | ube2m |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 1024478 ~ 1033504 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016881 | acid-amino acid ligase activity | molecular_function |
| id | description |
|---|---|
| K10579 | UBE2M, UBC12; ubiquitin-conjugating enzyme E2 M |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU398178 | lncRNA | upstream | 7847 | 1015972 ~ 1016631 (+) | True | G336243 |
| TU398176 | lncRNA | upstream | 16385 | 1006232 ~ 1008093 (+) | True | G336241 |
| TU398124 | lncRNA | upstream | 117586 | 890196 ~ 906892 (+) | False | G336202 |
| TU398135 | lncRNA | upstream | 117990 | 905239 ~ 906488 (+) | True | G336209 |
| TU398126 | lncRNA | upstream | 130982 | 889818 ~ 893496 (+) | True | G336202 |
| TU398182 | lncRNA | downstream | 84139 | 1117643 ~ 1139760 (+) | False | G336245 |
| TU398183 | lncRNA | downstream | 84139 | 1117643 ~ 1152914 (+) | True | G336245 |
| TU398244 | lncRNA | downstream | 88763 | 1122267 ~ 1123573 (+) | True | G336295 |
| TU398246 | lncRNA | downstream | 99484 | 1132988 ~ 1136107 (+) | False | mllt11 |
| TU398180 | lncRNA | downstream | 116512 | 1150016 ~ 1152914 (+) | False | G336245 |
| XM_034298639.1 | mRNA | upstream | 73095 | 949475 ~ 951383 (+) | True | LOC117595860 |
| XM_034298503.1 | mRNA | upstream | 74360 | 910572 ~ 950118 (+) | True | LOC113529000 |
| XM_034298638.1 | mRNA | upstream | 117708 | 893766 ~ 906770 (+) | True | utp18 |
| XM_026917884.2 | mRNA | upstream | 207235 | 806309 ~ 817243 (+) | True | si:dkey-89b17.4 |
| XM_026917885.2 | mRNA | upstream | 207235 | 806311 ~ 817243 (+) | False | si:dkey-89b17.4 |
| XM_034298746.1 | mRNA | downstream | 5461 | 1038965 ~ 1061366 (+) | False | kpnb1 |
| XM_034298745.1 | mRNA | downstream | 5462 | 1038966 ~ 1063015 (+) | True | kpnb1 |
| XM_034298747.1 | mRNA | downstream | 32263 | 1065767 ~ 1076546 (+) | True | LOC113529039 |
| XM_034298748.1 | mRNA | downstream | 32263 | 1065767 ~ 1076546 (+) | False | LOC113529039 |
| XM_034298360.1 | mRNA | downstream | 47490 | 1080994 ~ 1103079 (+) | True | LOC113529037 |
| TU398147 | other | upstream | 48157 | 973669 ~ 976321 (+) | True | G336213 |
| TU398091 | other | upstream | 229783 | 794117 ~ 794695 (+) | True | G336172 |
| TU398067 | other | upstream | 274804 | 739369 ~ 749674 (+) | True | G336161 |
| TU397921 | other | upstream | 737263 | 286849 ~ 287215 (+) | True | G336034 |
| TU398245 | other | downstream | 99484 | 1132988 ~ 1136107 (+) | False | mllt11 |
| TU398302 | other | downstream | 236305 | 1269809 ~ 1335530 (+) | False | G336334 |
| TU398322 | other | downstream | 292312 | 1325816 ~ 1327507 (+) | True | G336350 |
| TU398432 | other | downstream | 623813 | 1657317 ~ 1659459 (+) | True | G336433 |
| TU398943 | other | downstream | 842770 | 1876274 ~ 1945866 (+) | True | G336822 |
