Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403018.2 |
| length | 771 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC113528997 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 775875 ~ 779026 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko04113 | Meiosis - yeast |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU398085 | lncRNA | upstream | 3047 | 768195 ~ 772828 (+) | True | G336167 |
| TU398045 | lncRNA | upstream | 131737 | 643931 ~ 644138 (+) | True | G336143 |
| TU398043 | lncRNA | upstream | 143574 | 631774 ~ 632301 (+) | True | G336141 |
| TU398012 | lncRNA | upstream | 148926 | 622732 ~ 626949 (+) | False | G336115 |
| TU398126 | lncRNA | downstream | 110792 | 889818 ~ 893496 (+) | True | G336202 |
| TU398124 | lncRNA | downstream | 111170 | 890196 ~ 906892 (+) | False | G336202 |
| TU398135 | lncRNA | downstream | 126213 | 905239 ~ 906488 (+) | True | G336209 |
| TU398176 | lncRNA | downstream | 227206 | 1006232 ~ 1008093 (+) | True | G336241 |
| TU398178 | lncRNA | downstream | 236946 | 1015972 ~ 1016631 (+) | True | G336243 |
| XM_026917889.2 | mRNA | upstream | 64366 | 706407 ~ 711509 (+) | True | LOC113528988 |
| XM_026917896.2 | mRNA | upstream | 82379 | 690756 ~ 693496 (+) | True | LOC113528992 |
| XM_034298507.1 | mRNA | upstream | 90387 | 682280 ~ 685488 (+) | True | LOC113529047 |
| XM_026917895.2 | mRNA | upstream | 97345 | 675097 ~ 678530 (+) | True | LOC113528991 |
| XM_026917893.2 | mRNA | upstream | 111591 | 659869 ~ 664284 (+) | True | LOC113528990 |
| XM_034298470.1 | mRNA | downstream | 27279 | 806305 ~ 816470 (+) | False | si:dkey-89b17.4 |
| XM_034298471.1 | mRNA | downstream | 27279 | 806305 ~ 816470 (+) | False | si:dkey-89b17.4 |
| XM_026917884.2 | mRNA | downstream | 27283 | 806309 ~ 817243 (+) | True | si:dkey-89b17.4 |
| XM_026917885.2 | mRNA | downstream | 27285 | 806311 ~ 817243 (+) | False | si:dkey-89b17.4 |
| XM_034298638.1 | mRNA | downstream | 114740 | 893766 ~ 906770 (+) | True | utp18 |
| TU398067 | other | upstream | 26201 | 739369 ~ 749674 (+) | True | G336161 |
| TU397921 | other | upstream | 488660 | 286849 ~ 287215 (+) | True | G336034 |
| TU398091 | other | downstream | 15091 | 794117 ~ 794695 (+) | True | G336172 |
| TU398147 | other | downstream | 194643 | 973669 ~ 976321 (+) | True | G336213 |
| TU398245 | other | downstream | 353962 | 1132988 ~ 1136107 (+) | False | mllt11 |
| TU398302 | other | downstream | 490783 | 1269809 ~ 1335530 (+) | False | G336334 |
| TU398322 | other | downstream | 546790 | 1325816 ~ 1327507 (+) | True | G336350 |
