Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU424577 |
| length | 857 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 3 |
| gene id | ccne1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047619.1 |
| NCBI id | CM018565.1 |
| chromosome length | 19570078 |
| location | 344062 ~ 351769 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU424536 | lncRNA | upstream | 62242 | 284243 ~ 286527 (+) | True | G358312 |
| TU424539 | lncRNA | upstream | 74146 | 273454 ~ 274623 (+) | True | LOC113525132 |
| XR_003402628.2 | lncRNA | upstream | 74254 | 273464 ~ 274515 (+) | False | LOC113525132 |
| TU424527 | lncRNA | upstream | 168619 | 179938 ~ 180150 (+) | True | G358305 |
| TU424526 | lncRNA | upstream | 169455 | 179026 ~ 179314 (+) | True | G358304 |
| TU424576 | lncRNA | downstream | 27461 | 379230 ~ 424643 (+) | True | G358344 |
| TU424568 | lncRNA | downstream | 39564 | 391333 ~ 394621 (+) | True | G358338 |
| XR_004577246.1 | lncRNA | downstream | 47578 | 399347 ~ 400856 (+) | True | LOC117596071 |
| TU424569 | lncRNA | downstream | 96312 | 448081 ~ 452014 (+) | False | cmtm4 |
| TU424570 | lncRNA | downstream | 96312 | 448081 ~ 452014 (+) | True | cmtm4 |
| XM_026911576.2 | mRNA | upstream | 10128 | 330987 ~ 338641 (+) | True | si:ch211-260e23.9 |
| XM_026911574.2 | mRNA | upstream | 25439 | 320536 ~ 323330 (+) | True | plekhf1 |
| XM_026911593.2 | mRNA | upstream | 42006 | 299673 ~ 306763 (+) | True | LOC113525130 |
| XM_034299454.1 | mRNA | downstream | 11116 | 362885 ~ 376246 (+) | True | nae1 |
| XM_034299617.1 | mRNA | downstream | 54210 | 405979 ~ 420868 (+) | True | dync1li2 |
| XM_034299618.1 | mRNA | downstream | 54210 | 405979 ~ 420736 (+) | False | dync1li2 |
| XM_034299619.1 | mRNA | downstream | 75104 | 426873 ~ 448589 (+) | False | cmtm4 |
| XM_026937706.2 | mRNA | downstream | 114771 | 466540 ~ 476972 (+) | True | tk2 |
| TU424532 | other | upstream | 93 | 344118 ~ 348676 (+) | False | ccne1 |
| TU424567 | other | downstream | 75127 | 426896 ~ 438886 (+) | False | cmtm4 |
| XR_004577234.1 | other | downstream | 1538805 | 1890574 ~ 1904591 (+) | True | LOC117596061 |
| TU425115 | other | downstream | 1969402 | 2321171 ~ 2338758 (+) | False | c25h16orf87 |
| TU425321 | other | downstream | 2284520 | 2636289 ~ 2664941 (+) | False | igdcc4 |
| TU426380 | other | downstream | 3371257 | 3723026 ~ 3729877 (+) | False | cylda |
