Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU424851 |
| length | 352 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G358577 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047619.1 |
| NCBI id | CM018565.1 |
| chromosome length | 19570078 |
| location | 1140007 ~ 1140358 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU424781 | lncRNA | upstream | 167661 | 971580 ~ 972346 (+) | True | G358519 |
| TU424774 | lncRNA | upstream | 193493 | 916213 ~ 946514 (+) | False | G358513 |
| TU424780 | lncRNA | upstream | 195985 | 939236 ~ 944022 (+) | True | G358518 |
| TU424776 | lncRNA | upstream | 211316 | 926763 ~ 928691 (+) | True | G358515 |
| TU424772 | lncRNA | upstream | 220261 | 908496 ~ 919746 (+) | True | G358513 |
| TU424861 | lncRNA | downstream | 99556 | 1239914 ~ 1240138 (+) | True | G358587 |
| TU424994 | lncRNA | downstream | 309797 | 1450155 ~ 1450465 (+) | True | G358713 |
| TU425001 | lncRNA | downstream | 467281 | 1607639 ~ 1607911 (+) | True | G358720 |
| TU425010 | lncRNA | downstream | 575188 | 1715546 ~ 1715887 (+) | True | G358726 |
| TU425086 | lncRNA | downstream | 785450 | 1925808 ~ 1928313 (+) | True | G358796 |
| XM_026937569.2 | mRNA | upstream | 144776 | 953205 ~ 995231 (+) | True | cdh11 |
| XM_026937706.2 | mRNA | upstream | 663035 | 466540 ~ 476972 (+) | True | tk2 |
| XM_026937707.2 | mRNA | upstream | 663035 | 466649 ~ 476972 (+) | False | tk2 |
| XM_034299619.1 | mRNA | upstream | 691418 | 426873 ~ 448589 (+) | False | cmtm4 |
| XM_034299617.1 | mRNA | upstream | 719139 | 405979 ~ 420868 (+) | True | dync1li2 |
| XM_026937736.2 | mRNA | downstream | 163523 | 1303881 ~ 1433318 (+) | True | cdh8 |
| XM_026937737.2 | mRNA | downstream | 163523 | 1303881 ~ 1433318 (+) | False | cdh8 |
| XM_034299423.1 | mRNA | downstream | 249474 | 1389832 ~ 1433318 (+) | False | cdh8 |
| XM_034299457.1 | mRNA | downstream | 880362 | 2020720 ~ 2174969 (+) | True | itfg1 |
| XM_026937401.2 | mRNA | downstream | 1037620 | 2177978 ~ 2203598 (+) | True | LOC113540805 |
| TU424567 | other | upstream | 701121 | 426896 ~ 438886 (+) | False | cmtm4 |
| TU424577 | other | upstream | 788238 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424578 | other | upstream | 788238 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424579 | other | upstream | 788238 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424532 | other | upstream | 791331 | 344118 ~ 348676 (+) | False | ccne1 |
| XR_004577234.1 | other | downstream | 750216 | 1890574 ~ 1904591 (+) | True | LOC117596061 |
| TU425115 | other | downstream | 1180813 | 2321171 ~ 2338758 (+) | False | c25h16orf87 |
| TU425321 | other | downstream | 1495931 | 2636289 ~ 2664941 (+) | False | igdcc4 |
| TU426380 | other | downstream | 2582668 | 3723026 ~ 3729877 (+) | False | cylda |
| TU426382 | other | downstream | 2601428 | 3741786 ~ 3745457 (+) | False | cylda |
