Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000292 |
| length | 1404 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 9 |
| gene id | AMCG00000292 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 9911136 ~ 9920082 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU187938 | lncRNA | upstream | 134148 | 9719947 ~ 9776988 (+) | True | G149359 |
| TU187924 | lncRNA | upstream | 337572 | 9561557 ~ 9573564 (+) | False | AMCG00000281 |
| TU187903 | lncRNA | upstream | 395536 | 9514822 ~ 9515600 (+) | False | AMCG00000286 |
| TU187853 | lncRNA | upstream | 424455 | 9483359 ~ 9486681 (+) | False | AMCG00000285 |
| TU187785 | lncRNA | upstream | 625985 | 9280063 ~ 9285151 (+) | True | G149253 |
| TU188022 | lncRNA | downstream | 37631 | 9957713 ~ 9962571 (+) | True | G149416 |
| TU188017 | lncRNA | downstream | 52966 | 9973048 ~ 9975172 (+) | True | G149415 |
| TU188070 | lncRNA | downstream | 101340 | 10021422 ~ 10021853 (+) | True | G149450 |
| TU188079 | lncRNA | downstream | 109612 | 10029694 ~ 10030786 (+) | True | G149454 |
| TU188081 | lncRNA | downstream | 114492 | 10034574 ~ 10035072 (+) | True | G149455 |
| AMCG00000294 | mRNA | upstream | 34192 | 9864987 ~ 9876944 (+) | True | AMCG00000294 |
| AMCG00000293 | mRNA | upstream | 70707 | 9828089 ~ 9840429 (+) | True | AMCG00000293 |
| AMCG00000282 | mRNA | upstream | 164128 | 9721890 ~ 9747008 (+) | True | AMCG00000282 |
| AMCG00000283 | mRNA | upstream | 205687 | 9688747 ~ 9705449 (+) | True | AMCG00000283 |
| AMCG00000281 | mRNA | upstream | 320048 | 9573189 ~ 9591088 (+) | True | AMCG00000281 |
| AMCG00000306 | mRNA | downstream | 82639 | 10002721 ~ 10010111 (+) | True | AMCG00000306 |
| AMCG00000307 | mRNA | downstream | 143729 | 10063811 ~ 10072297 (+) | True | AMCG00000307 |
| AMCG00000297 | mRNA | downstream | 172911 | 10092993 ~ 10100250 (+) | True | AMCG00000297 |
| AMCG00000305 | mRNA | downstream | 628748 | 10548830 ~ 10549199 (+) | True | AMCG00000305 |
| AMCG00000304 | mRNA | downstream | 629850 | 10549932 ~ 10550914 (+) | True | AMCG00000304 |
| TU187550 | other | upstream | 1330024 | 8579717 ~ 8581112 (+) | False | AMCG00000249 |
| TU187300 | other | upstream | 2548429 | 7359278 ~ 7362707 (+) | False | AMCG00000217 |
| TU187301 | other | upstream | 2548429 | 7361020 ~ 7362707 (+) | True | AMCG00000217 |
| TU187267 | other | upstream | 2614472 | 7290666 ~ 7296664 (+) | True | AMCG00000216 |
| TU188032 | other | downstream | 49242 | 9969324 ~ 9970801 (+) | True | G149424 |
| TU188165 | other | downstream | 614508 | 10534590 ~ 10535137 (+) | True | G149525 |
| TU188404 | other | downstream | 2062378 | 11982460 ~ 11985715 (+) | False | AMCG00000352 |
| TU188603 | other | downstream | 2759588 | 12679670 ~ 12727903 (+) | True | G149859 |
| TU188861 | other | downstream | 3770757 | 13690839 ~ 13692589 (+) | True | G150069 |
