Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000313 |
| length | 924 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | AMCG00000313 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 11147655 ~ 11169942 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0044428 | obsolete nuclear part | cellular_component |
| GO:0016592 | mediator complex | cellular_component |
| id | description |
|---|---|
| ko04110 | Cell cycle |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188211 | lncRNA | upstream | 13622 | 11133401 ~ 11134033 (+) | True | G149566 |
| TU188204 | lncRNA | upstream | 56636 | 11090589 ~ 11091019 (+) | True | G149560 |
| TU188198 | lncRNA | upstream | 96427 | 10986970 ~ 11051228 (+) | True | G149556 |
| TU188179 | lncRNA | upstream | 434974 | 10712477 ~ 10712681 (+) | True | G149538 |
| TU188115 | lncRNA | upstream | 1056548 | 10090883 ~ 10091107 (+) | True | G149486 |
| TU188217 | lncRNA | downstream | 5720 | 11175662 ~ 11176066 (+) | True | G149572 |
| TU188233 | lncRNA | downstream | 52887 | 11222829 ~ 11223107 (+) | True | G149587 |
| TU188238 | lncRNA | downstream | 156244 | 11326186 ~ 11326551 (+) | True | G149591 |
| TU188242 | lncRNA | downstream | 168449 | 11338391 ~ 11341569 (+) | False | G149595 |
| TU188245 | lncRNA | downstream | 168449 | 11338391 ~ 11368225 (+) | True | G149595 |
| AMCG00000314 | mRNA | upstream | 15976 | 11127858 ~ 11131679 (+) | True | AMCG00000314 |
| AMCG00000304 | mRNA | upstream | 596741 | 10549932 ~ 10550914 (+) | True | AMCG00000304 |
| AMCG00000305 | mRNA | upstream | 598456 | 10548830 ~ 10549199 (+) | True | AMCG00000305 |
| AMCG00000297 | mRNA | upstream | 1047405 | 10092993 ~ 10100250 (+) | True | AMCG00000297 |
| AMCG00000307 | mRNA | upstream | 1075358 | 10063811 ~ 10072297 (+) | True | AMCG00000307 |
| AMCG00000315 | mRNA | downstream | 51773 | 11221715 ~ 11233015 (+) | True | AMCG00000315 |
| AMCG00000350 | mRNA | downstream | 400403 | 11570345 ~ 11571229 (+) | True | AMCG00000350 |
| AMCG00000327 | mRNA | downstream | 502265 | 11672207 ~ 11674687 (+) | True | AMCG00000327 |
| AMCG00000325 | mRNA | downstream | 507211 | 11677153 ~ 11679698 (+) | True | AMCG00000325 |
| AMCG00000326 | mRNA | downstream | 515612 | 11685554 ~ 11688479 (+) | True | AMCG00000326 |
| TU188165 | other | upstream | 612518 | 10534590 ~ 10535137 (+) | True | G149525 |
| TU188032 | other | upstream | 1176854 | 9969324 ~ 9970801 (+) | True | G149424 |
| TU187550 | other | upstream | 2566543 | 8579717 ~ 8581112 (+) | False | AMCG00000249 |
| TU187300 | other | upstream | 3784948 | 7359278 ~ 7362707 (+) | False | AMCG00000217 |
| TU188404 | other | downstream | 812518 | 11982460 ~ 11985715 (+) | False | AMCG00000352 |
| TU188603 | other | downstream | 1509728 | 12679670 ~ 12727903 (+) | True | G149859 |
| TU188861 | other | downstream | 2520897 | 13690839 ~ 13692589 (+) | True | G150069 |
| TU189044 | other | downstream | 2963196 | 14133138 ~ 14153840 (+) | True | AMCG00000412 |
| TU189714 | other | downstream | 5766051 | 16935993 ~ 16938282 (+) | True | G150750 |
