Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003971 |
| length | 330 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | AMCG00003971 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 26878702 ~ 26879865 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0001756 | somitogenesis | biological_process |
| GO:0009880 | embryonic pattern specification | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU5732 | lncRNA | upstream | 227135 | 26651285 ~ 26651567 (+) | True | G4694 |
| TU5691 | lncRNA | upstream | 291832 | 26582669 ~ 26586870 (+) | False | AMCG00003962 |
| TU5614 | lncRNA | upstream | 621677 | 26256781 ~ 26257025 (+) | True | G4595 |
| TU5613 | lncRNA | upstream | 622596 | 26255789 ~ 26256106 (+) | True | G4594 |
| TU5612 | lncRNA | upstream | 634065 | 26244247 ~ 26244637 (+) | True | G4593 |
| TU5845 | lncRNA | downstream | 402139 | 27282004 ~ 27282241 (+) | True | G4787 |
| TU5865 | lncRNA | downstream | 703706 | 27583571 ~ 27584034 (+) | True | G4804 |
| TU5868 | lncRNA | downstream | 841595 | 27721460 ~ 27776442 (+) | True | G4806 |
| TU5870 | lncRNA | downstream | 897425 | 27777290 ~ 27777659 (+) | True | G4808 |
| TU5905 | lncRNA | downstream | 1224345 | 28104210 ~ 28105707 (+) | True | G4837 |
| AMCG00003969 | mRNA | upstream | 124287 | 26721890 ~ 26754415 (+) | True | AMCG00003969 |
| AMCG00003964 | mRNA | upstream | 228311 | 26634477 ~ 26650391 (+) | True | AMCG00003964 |
| AMCG00003962 | mRNA | upstream | 291810 | 26582667 ~ 26586892 (+) | True | AMCG00003962 |
| AMCG00003963 | mRNA | upstream | 300498 | 26567730 ~ 26578204 (+) | True | AMCG00003963 |
| AMCG00003959 | mRNA | upstream | 317581 | 26532149 ~ 26561121 (+) | True | AMCG00003959 |
| AMCG00003977 | mRNA | downstream | 500694 | 27380559 ~ 27382002 (+) | True | AMCG00003977 |
| AMCG00003972 | mRNA | downstream | 550225 | 27430090 ~ 27449894 (+) | True | AMCG00003972 |
| AMCG00003973 | mRNA | downstream | 612641 | 27492506 ~ 27506149 (+) | True | AMCG00003973 |
| AMCG00003980 | mRNA | downstream | 1182690 | 28062555 ~ 28094602 (+) | True | AMCG00003980 |
| AMCG00003982 | mRNA | downstream | 1218195 | 28098060 ~ 28098326 (+) | True | AMCG00003982 |
| TU5497 | other | upstream | 1082911 | 25794052 ~ 25795791 (+) | False | AMCG00003930 |
| TU5311 | other | upstream | 2194782 | 24683400 ~ 24683920 (+) | True | G4360 |
| TU5028 | other | upstream | 3165568 | 23710238 ~ 23713134 (+) | False | AMCG00003898 |
| TU4606 | other | upstream | 4954915 | 21922636 ~ 21923787 (+) | True | G3799 |
| TU4563 | other | upstream | 5118072 | 21745850 ~ 21760630 (+) | True | G3771 |
| TU5898 | other | downstream | 1182498 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU5899 | other | downstream | 1182809 | 28062674 ~ 28067786 (+) | False | G4831 |
| TU6431 | other | downstream | 3391345 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU6554 | other | downstream | 4008130 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6919 | other | downstream | 6250255 | 33130120 ~ 33131186 (+) | True | G5642 |
