Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004058 |
| length | 1218 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 5 |
| gene id | AMCG00004058 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 30924788 ~ 30928491 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K13513 | LCLAT1, AGPAT8; lysocardiolipin and lysophospholipid acyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU6495 | lncRNA | upstream | 146518 | 30778047 ~ 30778270 (+) | True | G5297 |
| TU6489 | lncRNA | upstream | 183915 | 30740564 ~ 30740873 (+) | True | G5291 |
| TU6459 | lncRNA | upstream | 371574 | 30552977 ~ 30553214 (+) | True | G5272 |
| TU6458 | lncRNA | upstream | 379263 | 30545287 ~ 30545525 (+) | True | G5271 |
| TU6440 | lncRNA | upstream | 617613 | 30296867 ~ 30307175 (+) | True | AMCG00004039 |
| TU6638 | lncRNA | downstream | 64115 | 30992606 ~ 30992900 (+) | True | G5417 |
| TU6715 | lncRNA | downstream | 857843 | 31786334 ~ 31786883 (+) | True | G5482 |
| TU6723 | lncRNA | downstream | 1100513 | 32029004 ~ 32029301 (+) | True | G5490 |
| TU6726 | lncRNA | downstream | 1262829 | 32191320 ~ 32191542 (+) | True | G5493 |
| TU6733 | lncRNA | downstream | 1340257 | 32268748 ~ 32269071 (+) | True | G5499 |
| AMCG00004059 | mRNA | upstream | 11637 | 30897076 ~ 30913151 (+) | True | AMCG00004059 |
| AMCG00004056 | mRNA | upstream | 29964 | 30888032 ~ 30894824 (+) | False | AMCG00004056 |
| AMCG00004051 | mRNA | upstream | 75752 | 30842720 ~ 30849036 (+) | True | AMCG00004051 |
| AMCG00004049 | mRNA | upstream | 117555 | 30805091 ~ 30807233 (+) | True | AMCG00004049 |
| AMCG00004050 | mRNA | upstream | 122579 | 30782054 ~ 30802209 (+) | True | AMCG00004050 |
| AMCG00004064 | mRNA | downstream | 16981 | 30945472 ~ 30947477 (+) | True | AMCG00004064 |
| AMCG00004057 | mRNA | downstream | 33142 | 30961633 ~ 30969204 (+) | True | AMCG00004057 |
| AMCG00004065 | mRNA | downstream | 46485 | 30974976 ~ 30990100 (+) | True | AMCG00004065 |
| AMCG00004067 | mRNA | downstream | 101927 | 31030418 ~ 31039737 (+) | True | AMCG00004067 |
| AMCG00004066 | mRNA | downstream | 118654 | 31047145 ~ 31062709 (+) | True | AMCG00004066 |
| TU6554 | other | upstream | 29961 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6431 | other | upstream | 653264 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU5898 | other | upstream | 2821577 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU5899 | other | upstream | 2857002 | 28062674 ~ 28067786 (+) | False | G4831 |
| TU5497 | other | upstream | 5128997 | 25794052 ~ 25795791 (+) | False | AMCG00003930 |
| TU6919 | other | downstream | 2201629 | 33130120 ~ 33131186 (+) | True | G5642 |
| TU7209 | other | downstream | 3924372 | 34852863 ~ 34870320 (+) | True | AMCG00004138 |
| TU7437 | other | downstream | 4824042 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU7524 | other | downstream | 5343701 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7741 | other | downstream | 5845510 | 36774001 ~ 36774523 (+) | True | G6314 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00012298 | True | 2789 | mRNA | 0.55 | 6 | NC_007124.7 | 51956397 ~ 51963460 (+) |
| grasscarp (Ctenopharyngodon idella) | CI01180000_03223456_03224643.mRNA | True | 724 | mRNA | 0.55 | 4 | CI01180000 | 3223402 ~ 3224643 (+) |
