Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004064 |
| length | 1083 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 7 |
| gene id | AMCG00004064 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 30945472 ~ 30947477 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006424 | glutamyl-tRNA aminoacylation | biological_process |
| GO:0006433 | prolyl-tRNA aminoacylation | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004818 | glutamate-tRNA ligase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004827 | proline-tRNA ligase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU6495 | lncRNA | upstream | 167202 | 30778047 ~ 30778270 (+) | True | G5297 |
| TU6489 | lncRNA | upstream | 204599 | 30740564 ~ 30740873 (+) | True | G5291 |
| TU6459 | lncRNA | upstream | 392258 | 30552977 ~ 30553214 (+) | True | G5272 |
| TU6458 | lncRNA | upstream | 399947 | 30545287 ~ 30545525 (+) | True | G5271 |
| TU6440 | lncRNA | upstream | 638297 | 30296867 ~ 30307175 (+) | True | AMCG00004039 |
| TU6638 | lncRNA | downstream | 45129 | 30992606 ~ 30992900 (+) | True | G5417 |
| TU6715 | lncRNA | downstream | 838857 | 31786334 ~ 31786883 (+) | True | G5482 |
| TU6723 | lncRNA | downstream | 1081527 | 32029004 ~ 32029301 (+) | True | G5490 |
| TU6726 | lncRNA | downstream | 1243843 | 32191320 ~ 32191542 (+) | True | G5493 |
| TU6733 | lncRNA | downstream | 1321271 | 32268748 ~ 32269071 (+) | True | G5499 |
| AMCG00004058 | mRNA | upstream | 16981 | 30924788 ~ 30928491 (+) | True | AMCG00004058 |
| AMCG00004059 | mRNA | upstream | 32321 | 30897076 ~ 30913151 (+) | True | AMCG00004059 |
| AMCG00004056 | mRNA | upstream | 50648 | 30888032 ~ 30894824 (+) | False | AMCG00004056 |
| AMCG00004051 | mRNA | upstream | 96436 | 30842720 ~ 30849036 (+) | True | AMCG00004051 |
| AMCG00004049 | mRNA | upstream | 138239 | 30805091 ~ 30807233 (+) | True | AMCG00004049 |
| AMCG00004057 | mRNA | downstream | 14156 | 30961633 ~ 30969204 (+) | True | AMCG00004057 |
| AMCG00004065 | mRNA | downstream | 27499 | 30974976 ~ 30990100 (+) | True | AMCG00004065 |
| AMCG00004067 | mRNA | downstream | 82941 | 31030418 ~ 31039737 (+) | True | AMCG00004067 |
| AMCG00004066 | mRNA | downstream | 99668 | 31047145 ~ 31062709 (+) | True | AMCG00004066 |
| AMCG00004071 | mRNA | downstream | 422905 | 31370382 ~ 31371158 (+) | True | AMCG00004071 |
| TU6554 | other | upstream | 50645 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6431 | other | upstream | 673948 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU5898 | other | upstream | 2842261 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU5899 | other | upstream | 2877686 | 28062674 ~ 28067786 (+) | False | G4831 |
| TU5497 | other | upstream | 5149681 | 25794052 ~ 25795791 (+) | False | AMCG00003930 |
| TU6919 | other | downstream | 2182643 | 33130120 ~ 33131186 (+) | True | G5642 |
| TU7209 | other | downstream | 3905386 | 34852863 ~ 34870320 (+) | True | AMCG00004138 |
| TU7437 | other | downstream | 4805056 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU7524 | other | downstream | 5324715 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7741 | other | downstream | 5826524 | 36774001 ~ 36774523 (+) | True | G6314 |
