Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004082 |
| length | 387 |
| RNA type | mRNA |
| GC content | 0.64 |
| exon number | 1 |
| gene id | AMCG00004082 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 32558979 ~ 32559365 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0003677 | DNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU6774 | lncRNA | upstream | 156596 | 32400405 ~ 32402383 (+) | True | AMCG00004079 |
| TU6773 | lncRNA | upstream | 171444 | 32384435 ~ 32387535 (+) | True | G5529 |
| TU6771 | lncRNA | upstream | 175300 | 32383409 ~ 32383679 (+) | True | G5527 |
| TU6760 | lncRNA | upstream | 208876 | 32348390 ~ 32350103 (+) | True | G5522 |
| TU6735 | lncRNA | upstream | 249067 | 32309505 ~ 32309912 (+) | True | G5501 |
| TU6819 | lncRNA | downstream | 52468 | 32611833 ~ 32612051 (+) | True | G5569 |
| TU6947 | lncRNA | downstream | 878963 | 33438328 ~ 33445420 (+) | True | G5662 |
| TU6968 | lncRNA | downstream | 913671 | 33473036 ~ 33473330 (+) | True | G5680 |
| TU6969 | lncRNA | downstream | 915477 | 33474842 ~ 33475047 (+) | True | G5681 |
| TU6976 | lncRNA | downstream | 1006808 | 33566173 ~ 33567479 (+) | True | G5688 |
| AMCG00004081 | mRNA | upstream | 29140 | 32499473 ~ 32529839 (+) | True | AMCG00004081 |
| AMCG00004083 | mRNA | upstream | 103133 | 32449407 ~ 32455846 (+) | True | AMCG00004083 |
| AMCG00004080 | mRNA | upstream | 130066 | 32428459 ~ 32428913 (+) | True | AMCG00004080 |
| AMCG00004079 | mRNA | upstream | 156641 | 32400546 ~ 32402338 (+) | False | AMCG00004079 |
| AMCG00004075 | mRNA | upstream | 212384 | 32335392 ~ 32346595 (+) | True | AMCG00004075 |
| AMCG00004086 | mRNA | downstream | 12214 | 32571579 ~ 32582699 (+) | True | AMCG00004086 |
| AMCG00004084 | mRNA | downstream | 24175 | 32583540 ~ 32596401 (+) | True | AMCG00004084 |
| AMCG00004085 | mRNA | downstream | 39088 | 32598453 ~ 32600592 (+) | True | AMCG00004085 |
| AMCG00004087 | mRNA | downstream | 169295 | 32728660 ~ 32774812 (+) | True | AMCG00004087 |
| AMCG00004089 | mRNA | downstream | 255378 | 32814743 ~ 32836681 (+) | True | AMCG00004089 |
| TU6554 | other | upstream | 1664152 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6431 | other | upstream | 2287455 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU5898 | other | upstream | 4455768 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU5899 | other | upstream | 4491193 | 28062674 ~ 28067786 (+) | False | G4831 |
| TU5497 | other | upstream | 6763188 | 25794052 ~ 25795791 (+) | False | AMCG00003930 |
| TU6919 | other | downstream | 570755 | 33130120 ~ 33131186 (+) | True | G5642 |
| TU7209 | other | downstream | 2293498 | 34852863 ~ 34870320 (+) | True | AMCG00004138 |
| TU7437 | other | downstream | 3193168 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU7524 | other | downstream | 3712827 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7741 | other | downstream | 4214636 | 36774001 ~ 36774523 (+) | True | G6314 |
