Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004448 |
| length | 1254 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 3 |
| gene id | AMCG00004448 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 49984727 ~ 49987491 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | cellular_component |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K02140 | ATPeFG, ATP5L, ATP20; F-type H+-transporting ATPase subunit g |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU10255 | lncRNA | upstream | 33211 | 49950619 ~ 49951516 (+) | False | AMCG00004449 |
| TU10214 | lncRNA | upstream | 170703 | 49811335 ~ 49814024 (+) | False | AMCG00004442 |
| TU10096 | lncRNA | upstream | 398632 | 49582118 ~ 49586095 (+) | True | G8188 |
| TU10055 | lncRNA | upstream | 548976 | 49434043 ~ 49435751 (+) | True | G8167 |
| TU10030 | lncRNA | upstream | 665911 | 49307845 ~ 49318816 (+) | False | AMCG00004425 |
| TU10311 | lncRNA | downstream | 78944 | 50066435 ~ 50068081 (+) | True | G8356 |
| TU10334 | lncRNA | downstream | 150138 | 50137629 ~ 50139705 (+) | True | G8371 |
| TU10335 | lncRNA | downstream | 155814 | 50143305 ~ 50144990 (+) | True | G8372 |
| TU10336 | lncRNA | downstream | 157880 | 50145371 ~ 50145823 (+) | True | G8373 |
| TU10337 | lncRNA | downstream | 160385 | 50147876 ~ 50148195 (+) | True | G8374 |
| AMCG00004450 | mRNA | upstream | 1569 | 49968474 ~ 49983158 (+) | True | AMCG00004450 |
| AMCG00004452 | mRNA | upstream | 21011 | 49952140 ~ 49963716 (+) | True | AMCG00004452 |
| AMCG00004449 | mRNA | upstream | 33194 | 49938552 ~ 49951533 (+) | True | AMCG00004449 |
| AMCG00004451 | mRNA | upstream | 77876 | 49897636 ~ 49906851 (+) | True | AMCG00004451 |
| AMCG00004454 | mRNA | upstream | 91716 | 49883386 ~ 49893011 (+) | True | AMCG00004454 |
| AMCG00004453 | mRNA | downstream | 1784 | 49989275 ~ 49989664 (+) | True | AMCG00004453 |
| AMCG00004455 | mRNA | downstream | 16819 | 50004310 ~ 50032342 (+) | True | AMCG00004455 |
| AMCG00004458 | mRNA | downstream | 133938 | 50121429 ~ 50135834 (+) | True | AMCG00004458 |
| AMCG00004459 | mRNA | downstream | 197211 | 50184702 ~ 50187493 (+) | True | AMCG00004459 |
| AMCG00004462 | mRNA | downstream | 212014 | 50199505 ~ 50212190 (+) | True | AMCG00004462 |
| TU9962 | other | upstream | 1050632 | 48932450 ~ 48934095 (+) | True | G8099 |
| TU9841 | other | upstream | 1837571 | 48146888 ~ 48147156 (+) | True | G7999 |
| TU9559 | other | upstream | 4016421 | 45962010 ~ 45968306 (+) | True | AMCG00004380 |
| TU9000 | other | upstream | 7293618 | 42688779 ~ 42691109 (+) | True | G7329 |
| TU8899 | other | upstream | 7768365 | 42212510 ~ 42216362 (+) | False | AMCG00004304 |
| TU10340 | other | downstream | 163773 | 50151264 ~ 50157719 (+) | True | G8377 |
| TU10527 | other | downstream | 756300 | 50743791 ~ 50753349 (+) | False | AMCG00004477 |
| TU10626 | other | downstream | 1127450 | 51114941 ~ 51115262 (+) | True | G8606 |
| TU10780 | other | downstream | 1952070 | 51939561 ~ 51946818 (+) | True | AMCG00004501 |
| TU10796 | other | downstream | 2001862 | 51989353 ~ 52013630 (+) | True | AMCG00004509 |
