RNA id: TU7448


Basic Information

Item Value
RNA id TU7448
length 229
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G6067
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 35820255 ~ 35820483 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tgacatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaactaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaagcatttaagtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7383 lncRNA upstream 353600 35465862 ~ 35466655 (+) True G6007
TU7378 lncRNA upstream 364368 35455676 ~ 35455887 (+) True G6002
TU7229 lncRNA upstream 470228 34899636 ~ 35350027 (+) True G5875
TU7270 lncRNA upstream 513306 35301103 ~ 35306949 (+) True G5914
TU7220 lncRNA upstream 924594 34894102 ~ 34895661 (+) True G5867
TU7461 lncRNA downstream 206796 36027279 ~ 36045282 (+) True AMCG00004160
TU7487 lncRNA downstream 341123 36161606 ~ 36165870 (+) True G6102
TU7620 lncRNA downstream 675357 36495840 ~ 36520594 (+) True G6224
TU7622 lncRNA downstream 706185 36526668 ~ 36539067 (+) True G6225
TU7638 lncRNA downstream 733421 36553904 ~ 36555108 (+) True G6240
AMCG00004158 mRNA upstream 54075 35752450 ~ 35766180 (+) False AMCG00004158
AMCG00004157 mRNA upstream 135862 35642996 ~ 35684393 (+) True AMCG00004157
AMCG00004151 mRNA upstream 361472 35457154 ~ 35458783 (+) True AMCG00004151
AMCG00004150 mRNA upstream 364733 35451071 ~ 35455522 (+) True AMCG00004150
AMCG00004145 mRNA upstream 413302 35398380 ~ 35406953 (+) True AMCG00004145
AMCG00004163 mRNA downstream 15290 35835773 ~ 35837710 (+) True AMCG00004163
AMCG00004160 mRNA downstream 206798 36027281 ~ 36045282 (+) False AMCG00004160
AMCG00004161 mRNA downstream 247097 36067580 ~ 36073621 (+) True AMCG00004161
AMCG00004159 mRNA downstream 294018 36114501 ~ 36128960 (+) True AMCG00004159
AMCG00004165 mRNA downstream 313523 36134006 ~ 36158549 (+) True AMCG00004165
TU7437 other upstream 54075 35752533 ~ 35766180 (+) True AMCG00004158
TU7209 other upstream 949935 34852863 ~ 34870320 (+) True AMCG00004138
TU6919 other upstream 2689069 33130120 ~ 33131186 (+) True G5642
TU6554 other upstream 4925428 30887995 ~ 30894827 (+) True AMCG00004056
TU6431 other upstream 5548731 30271210 ~ 30271524 (+) True G5245
TU7524 other downstream 451709 36272192 ~ 36274930 (+) False AMCG00004167
TU7741 other downstream 953518 36774001 ~ 36774523 (+) True G6314
TU7756 other downstream 1041064 36861547 ~ 36891746 (+) True G6328
TU7800 other downstream 1178874 36999357 ~ 37000158 (+) True G6369
TU8679 other downstream 5639093 41459576 ~ 41507231 (+) True G7094

Expression Profile