RNA id: TU7737



Basic Information


Item Value
RNA id TU7737
length 287
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G6310
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36767737 ~ 36768023 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atatatatatatatagatggatagatgttatttttaaacaagcaTAGAAAGATGGTATTTATAACTAATAAAAacttaagtattttaaatagcCTGTAAGAACAGTTCTTCCAAGCGAAAAATACTGGGATGTTTGGGATGCAGAGAAAACCTTTTGCCCTTCTTGTCCTCCACTCGGACAGCTGTTTTCAGCTGTTGGTGTACATGGTGTATTGGTTTGTACCTGATGAGCATTCCAGAGTTTGTATGATAACCagaatgcaaattaaagcaataatttGGTGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7686 lncRNA upstream 60302 36705670 ~ 36707435 (+) True G6277
TU7685 lncRNA upstream 62978 36704508 ~ 36704759 (+) True G6276
TU7684 lncRNA upstream 64769 36702705 ~ 36702968 (+) True G6275
TU7683 lncRNA upstream 65288 36702213 ~ 36702449 (+) True G6274
TU7682 lncRNA upstream 66286 36701087 ~ 36701451 (+) True G6273
TU7742 lncRNA downstream 6962 36774985 ~ 36776982 (+) True G6315
TU7743 lncRNA downstream 9106 36777129 ~ 36777523 (+) True G6316
TU7744 lncRNA downstream 9911 36777934 ~ 36778165 (+) True G6317
TU7745 lncRNA downstream 10345 36778368 ~ 36778577 (+) True G6318
TU7746 lncRNA downstream 10857 36778880 ~ 36779150 (+) True G6319
AMCG00004186 mRNA upstream 2531 36748856 ~ 36765206 (+) True AMCG00004186
AMCG00004180 mRNA upstream 21672 36742627 ~ 36746065 (+) True AMCG00004180
AMCG00004179 mRNA upstream 77453 36689380 ~ 36690284 (+) False AMCG00004179
AMCG00004176 mRNA upstream 98089 36663802 ~ 36669648 (+) True AMCG00004176
AMCG00004174 mRNA upstream 265621 36501826 ~ 36502116 (+) True AMCG00004174
AMCG00004187 mRNA downstream 22411 36790434 ~ 36873869 (+) True AMCG00004187
AMCG00004192 mRNA downstream 116335 36884358 ~ 36904094 (+) True AMCG00004192
AMCG00004191 mRNA downstream 144623 36912646 ~ 36918990 (+) True AMCG00004191
AMCG00004190 mRNA downstream 168881 36936904 ~ 36939547 (+) True AMCG00004190
AMCG00004193 mRNA downstream 430900 37198923 ~ 37231208 (+) True AMCG00004193
TU7524 other upstream 492807 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 1001557 35752533 ~ 35766180 (+) True AMCG00004158
TU7209 other upstream 1897417 34852863 ~ 34870320 (+) True AMCG00004138
TU6919 other upstream 3636551 33130120 ~ 33131186 (+) True G5642
TU6554 other upstream 5872910 30887995 ~ 30894827 (+) True AMCG00004056
TU7741 other downstream 5978 36774001 ~ 36774523 (+) True G6314
TU7756 other downstream 93524 36861547 ~ 36891746 (+) True G6328
TU7800 other downstream 231334 36999357 ~ 37000158 (+) True G6369
TU8679 other downstream 4691553 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 5444487 42212510 ~ 42216362 (+) False AMCG00004304

Expression Profile