RNA id: TU7741



Basic Information


Item Value
RNA id TU7741
length 523
RNA type TUCP
GC content 0.47
exon number 1
gene id G6314
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36774001 ~ 36774523 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGGATATATTATTGGATATAACGTGATGGTGTACTGGAACTTCAAGGGCATCCTGACTGTTGTTGCAAGTTCCAAAGTACTTTAACTTGGCAAGCCCACCATCTCCCATTCTGCAACCTCTAGACTGTGCTTCATCTCTGTCCCTCCGCTCAATGCAATCCCACTGCCTGCCCACACAGGGCAGCCAAGACTATCGCCCTCCCAGGAGCGGACTCACCCATTTCTGCGGGTCCTTGTGTATGTGCCTGGGCACCTTCTTGCCGGGCAGCCTTTCCATGCCTGACTTGTTCACAGTTTCTGGGCTGGTGCTGCTCAGCATCTGCTCAGCCATGGGCACTTCGTTTGAGCTGCTTGGAGAACTTGCGAGGCCAGCAAGGCCACAGGAAAACTTGGTTATGGATCACGGCGCAAAATCCAGGCACCCTGCTGCATTAATGAGCCTCATTCCTCTGCCTGGAACTACAGCAATCCTTTCACCGAgccattcctctccctcccttgcCTTATCTGGTGAGGTAATGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7737 lncRNA upstream 5978 36767737 ~ 36768023 (+) True G6310
TU7686 lncRNA upstream 66566 36705670 ~ 36707435 (+) True G6277
TU7685 lncRNA upstream 69242 36704508 ~ 36704759 (+) True G6276
TU7684 lncRNA upstream 71033 36702705 ~ 36702968 (+) True G6275
TU7683 lncRNA upstream 71552 36702213 ~ 36702449 (+) True G6274
TU7742 lncRNA downstream 462 36774985 ~ 36776982 (+) True G6315
TU7743 lncRNA downstream 2606 36777129 ~ 36777523 (+) True G6316
TU7744 lncRNA downstream 3411 36777934 ~ 36778165 (+) True G6317
TU7745 lncRNA downstream 3845 36778368 ~ 36778577 (+) True G6318
TU7746 lncRNA downstream 4357 36778880 ~ 36779150 (+) True G6319
AMCG00004186 mRNA upstream 8795 36748856 ~ 36765206 (+) True AMCG00004186
AMCG00004180 mRNA upstream 27936 36742627 ~ 36746065 (+) True AMCG00004180
AMCG00004179 mRNA upstream 83717 36689380 ~ 36690284 (+) False AMCG00004179
AMCG00004176 mRNA upstream 104353 36663802 ~ 36669648 (+) True AMCG00004176
AMCG00004174 mRNA upstream 271885 36501826 ~ 36502116 (+) True AMCG00004174
AMCG00004187 mRNA downstream 15911 36790434 ~ 36873869 (+) True AMCG00004187
AMCG00004192 mRNA downstream 109835 36884358 ~ 36904094 (+) True AMCG00004192
AMCG00004191 mRNA downstream 138123 36912646 ~ 36918990 (+) True AMCG00004191
AMCG00004190 mRNA downstream 162381 36936904 ~ 36939547 (+) True AMCG00004190
AMCG00004193 mRNA downstream 424400 37198923 ~ 37231208 (+) True AMCG00004193
TU7524 other upstream 499071 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 1007821 35752533 ~ 35766180 (+) True AMCG00004158
TU7209 other upstream 1903681 34852863 ~ 34870320 (+) True AMCG00004138
TU6919 other upstream 3642815 33130120 ~ 33131186 (+) True G5642
TU6554 other upstream 5879174 30887995 ~ 30894827 (+) True AMCG00004056
TU7756 other downstream 87024 36861547 ~ 36891746 (+) True G6328
TU7800 other downstream 224834 36999357 ~ 37000158 (+) True G6369
TU8679 other downstream 4685053 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 5437987 42212510 ~ 42216362 (+) False AMCG00004304
TU9000 other downstream 5914256 42688779 ~ 42691109 (+) True G7329

Expression Profile