Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005802 |
| length | 1119 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 11 |
| gene id | AMCG00005802 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 10065160 ~ 10089769 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K03327 | TC.MATE, SLC47A, norM, mdtK, dinF; multidrug resistance protein, MATE family |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU194391 | lncRNA | upstream | 132202 | 9905772 ~ 9944143 (+) | True | G154343 |
| TU194291 | lncRNA | upstream | 634964 | 9440493 ~ 9441381 (+) | True | G154252 |
| TU194189 | lncRNA | upstream | 882158 | 9192296 ~ 9194187 (+) | True | G154175 |
| TU194153 | lncRNA | upstream | 967975 | 9100429 ~ 9108370 (+) | True | G154147 |
| TU194520 | lncRNA | downstream | 177504 | 10267273 ~ 10356244 (+) | True | AMCG00005929 |
| TU194528 | lncRNA | downstream | 195745 | 10285514 ~ 10332094 (+) | False | G154447 |
| TU194535 | lncRNA | downstream | 213188 | 10302957 ~ 10303497 (+) | True | G154451 |
| TU194536 | lncRNA | downstream | 214449 | 10304218 ~ 10304909 (+) | False | AMCG00005851 |
| TU194527 | lncRNA | downstream | 238266 | 10328035 ~ 10328999 (+) | True | G154447 |
| AMCG00005798 | mRNA | upstream | 23536 | 10043818 ~ 10052809 (+) | True | AMCG00005798 |
| AMCG00005799 | mRNA | upstream | 43523 | 10020967 ~ 10032822 (+) | True | AMCG00005799 |
| AMCG00005806 | mRNA | upstream | 108198 | 9946752 ~ 9968147 (+) | True | AMCG00005806 |
| AMCG00005807 | mRNA | upstream | 133021 | 9941462 ~ 9943324 (+) | True | AMCG00005807 |
| AMCG00005808 | mRNA | upstream | 155275 | 9907846 ~ 9921070 (+) | True | AMCG00005808 |
| AMCG00005934 | mRNA | downstream | 42359 | 10132128 ~ 10136716 (+) | True | AMCG00005934 |
| AMCG00005928 | mRNA | downstream | 117551 | 10207320 ~ 10218325 (+) | True | AMCG00005928 |
| AMCG00005927 | mRNA | downstream | 170880 | 10260649 ~ 10261465 (+) | True | AMCG00005927 |
| AMCG00005929 | mRNA | downstream | 177504 | 10267273 ~ 10271460 (+) | False | AMCG00005929 |
| AMCG00005851 | mRNA | downstream | 208120 | 10297889 ~ 10304837 (+) | True | AMCG00005851 |
| TU194377 | other | upstream | 192390 | 9881382 ~ 9883955 (+) | True | G154330 |
| TU194323 | other | upstream | 486547 | 9587802 ~ 9589798 (+) | True | G154283 |
| TU194290 | other | upstream | 638076 | 9435900 ~ 9438269 (+) | True | G154251 |
| TU193852 | other | upstream | 1569270 | 8504195 ~ 8507075 (+) | False | AMCG00005720 |
| TU193739 | other | upstream | 1845755 | 8215890 ~ 8230590 (+) | False | G153815 |
| TU194579 | other | downstream | 372768 | 10462537 ~ 10468351 (+) | False | AMCG00005821 |
| TU194578 | other | downstream | 380774 | 10470543 ~ 10471631 (+) | True | G154486 |
| TU194591 | other | downstream | 422735 | 10512504 ~ 10516390 (+) | True | G154499 |
| TU194711 | other | downstream | 632563 | 10722332 ~ 10730209 (+) | False | AMCG00005834 |
| TU194757 | other | downstream | 823628 | 10913397 ~ 10915729 (+) | True | G154636 |
