RNA id: AMCG00013865


Basic Information

Item Value
RNA id AMCG00013865
length 516
RNA type mRNA
GC content 0.66
exon number 2
gene id AMCG00013865
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45783866 ~ 45784824 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGCCACTGCTGCAGCGGCACCAAAGCGGAGATGAACCCCGAGCTGACGGCGGCGGCGGGCTTCGTCACCAGCCTGCTGCGGACCCGGGGCTGCCTGAGcgagcagcagctgcaggtgTTCAGCGCCTCGCTGCAGGACGCGCTGGCAGAGCACTACAGGCACCACTGGTTCCCCGACAGGCCCCAGAAGGGATCCGGCTACCGTTGCATTCGGATTAACCACGAAATGGACCCGATCATCAGCAAAGTGGCCGGCAGGATCAGACTGAGCAGCCAGCAGCTGTACGAGCTCCTGCCCCGGGAGCTGACGCTGTGGGTCGACCCGTACGAGGTGTCCTACCGCATCGGCGAGGACGGCTCCATCTGCGTCCTGTACGAGGCCGAGGCCCCGGCGCCCAGCAGCGCCCCCGCCGCCAGCAGCACTTCCTACAGCGGGATGTACACATGCAAGAAGCAGTACCTGATGGGCCGCGCAAGCCCCCCCAAGAACTACCTGATGACCGTCTCCAGTTAG

Function

GO: NA

KEGG:

id description
K14443 TOB; protein Tob/BTG

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU58925 lncRNA downstream 161111 45622515 ~ 45622755 (-) True G47259
TU58873 lncRNA downstream 439851 45343301 ~ 45344015 (-) False AMCG00013846
TU58833 lncRNA downstream 515470 45268054 ~ 45268396 (-) True G47185
TU58826 lncRNA downstream 678979 45104223 ~ 45104887 (-) True G47180
TU58812 lncRNA downstream 816938 44966010 ~ 44966928 (-) True G47168
TU59047 lncRNA upstream 40899 45825723 ~ 45826654 (-) True G47358
TU59048 lncRNA upstream 43141 45827965 ~ 45828251 (-) True G47359
TU59058 lncRNA upstream 61025 45845849 ~ 45854800 (-) True G47365
TU59095 lncRNA upstream 136282 45921106 ~ 45922914 (-) True G47391
TU59096 lncRNA upstream 136282 45921106 ~ 45922870 (-) False G47391
AMCG00013866 mRNA downstream 31278 45743779 ~ 45752588 (-) True AMCG00013866
AMCG00013867 mRNA downstream 71287 45712091 ~ 45712579 (-) True AMCG00013867
AMCG00013864 mRNA downstream 81093 45695635 ~ 45702773 (-) True AMCG00013864
AMCG00013860 mRNA downstream 101776 45675256 ~ 45682090 (-) True AMCG00013860
AMCG00013858 mRNA downstream 115585 45664880 ~ 45668281 (-) True AMCG00013858
AMCG00013875 mRNA upstream 20607 45805431 ~ 45806333 (-) True AMCG00013875
AMCG00013874 mRNA upstream 22181 45807005 ~ 45816694 (-) True AMCG00013874
AMCG00013877 mRNA upstream 38293 45823117 ~ 45831441 (-) True AMCG00013877
AMCG00013876 mRNA upstream 72642 45857466 ~ 45859867 (-) True AMCG00013876
AMCG00013882 mRNA upstream 134812 45919636 ~ 45928309 (-) True AMCG00013882
TU58927 other downstream 159971 45623238 ~ 45623895 (-) True G47261
TU58280 other downstream 3082798 42699506 ~ 42701068 (-) True G46742
TU57875 other downstream 5175338 40603601 ~ 40608528 (-) True G46423
TU57869 other downstream 5196474 40586816 ~ 40587392 (-) True G46418
TU57809 other downstream 5355241 40386061 ~ 40428625 (-) True AMCG00013730
TU59115 other upstream 139098 45923922 ~ 45924348 (-) False AMCG00013882
TU59142 other upstream 179067 45963891 ~ 45974311 (-) True AMCG00013883
TU59204 other upstream 290605 46075429 ~ 46083542 (-) True AMCG00013890
TU59251 other upstream 375715 46160539 ~ 46163487 (-) True G47501
TU59474 other upstream 1087045 46871869 ~ 46875370 (-) True G47666

Expression Profile