RNA id: AMCG00013883


Basic Information

Item Value
RNA id AMCG00013883
length 558
RNA type mRNA
GC content 0.59
exon number 6
gene id AMCG00013883
representative False

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45962190 ~ 45974311 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGGTGGTTCCAGCAGGGCCTGTGTGCCCTCCCGGTGGTGCTGGTGGTCTGGACTTCGGGCACCTTCATCCTCTCCTACGTCACCGCCGTGCTGCTCCACCATGTGGACCCCCTGGTTCCCTATATCAGTGACACGGGGACCGTTGTTCCAGAGAGATGTGTGTTTGGGATCATGCTCAACATTGCATCCTTTTTAGGTATTGCCACCATGTACGTGAGATACAAGCAGGTGGAAGCCCTCACTAGGAATGATGACAGCGTCCGCAGGTGGAACATGGCCGGCCTGGTGCTCGGGGTCATCAGCTGCTTCGGCATGTGCATCGGCTACACGGCCCACATCATCAGCACCATTTCGGAGTGGTCTCTGGCCTTCTCCTTCGTCTGCTTCTTCCTCACCTACATTCGGGATTTCCAGACAACACCGGGCCCTGAGGCCTGGAAGGCTGTGTGTGAGGCTCGCGTGAAGAGGCACTTCTGCACAGAGCCGCCTGGGGTTGTGCTGCTGCGAGTCCAAGGGCCCGTGCACCGGGGCGGGGGTGCAGGTGCTGTGGTTTGA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59095 lncRNA downstream 39276 45921106 ~ 45922914 (-) True G47391
TU59096 lncRNA downstream 39320 45921106 ~ 45922870 (-) False G47391
TU59058 lncRNA downstream 107390 45845849 ~ 45854800 (-) True G47365
TU59048 lncRNA downstream 133939 45827965 ~ 45828251 (-) True G47359
TU59047 lncRNA downstream 135536 45825723 ~ 45826654 (-) True G47358
TU59313 lncRNA upstream 259715 46231325 ~ 46238514 (-) True G47538
TU59342 lncRNA upstream 327551 46299161 ~ 46302700 (-) True AMCG00013903
TU59468 lncRNA upstream 832001 46803611 ~ 46838764 (-) True G47661
TU59536 lncRNA upstream 1085929 47057539 ~ 47120601 (-) True G47718
TU59534 lncRNA upstream 1099733 47071343 ~ 47075028 (-) True G47717
AMCG00013882 mRNA downstream 33881 45919636 ~ 45928309 (-) True AMCG00013882
AMCG00013876 mRNA downstream 102323 45857466 ~ 45859867 (-) True AMCG00013876
AMCG00013877 mRNA downstream 130749 45823117 ~ 45831441 (-) True AMCG00013877
AMCG00013874 mRNA downstream 145496 45807005 ~ 45816694 (-) True AMCG00013874
AMCG00013875 mRNA downstream 155857 45805431 ~ 45806333 (-) True AMCG00013875
AMCG00013887 mRNA upstream 7496 45979106 ~ 45991807 (-) True AMCG00013887
AMCG00013886 mRNA upstream 37494 46009104 ~ 46023024 (-) True AMCG00013886
AMCG00013889 mRNA upstream 56805 46028415 ~ 46038881 (-) True AMCG00013889
AMCG00013888 mRNA upstream 78983 46050593 ~ 46074428 (-) True AMCG00013888
AMCG00013890 mRNA upstream 104154 46075764 ~ 46083314 (-) False AMCG00013890
TU59115 other downstream 37842 45923922 ~ 45924348 (-) False AMCG00013882
TU58927 other downstream 338295 45623238 ~ 45623895 (-) True G47261
TU58280 other downstream 3261122 42699506 ~ 42701068 (-) True G46742
TU57875 other downstream 5353662 40603601 ~ 40608528 (-) True G46423
TU57869 other downstream 5374798 40586816 ~ 40587392 (-) True G46418
TU59204 other upstream 103819 46075429 ~ 46083542 (-) True AMCG00013890
TU59251 other upstream 188929 46160539 ~ 46163487 (-) True G47501
TU59474 other upstream 900259 46871869 ~ 46875370 (-) True G47666
TU59572 other upstream 1226733 47198343 ~ 47200897 (-) False AMCG00013932
TU59752 other upstream 1893240 47864850 ~ 47868863 (-) True AMCG00013946

Expression Profile