RNA id: AMCG00013922


Basic Information

Item Value
RNA id AMCG00013922
length 294
RNA type mRNA
GC content 0.64
exon number 2
gene id AMCG00013922
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 47024851 ~ 47026381 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCATTTTCTCCAGGGGGgctgcaCTCCTCCAGCTCAGCCCCTTCCTCCCGTGACTCAGGCCCCCCCCGCCCCTGTGACTCAGGcccccaaccccaaccctgGCAGTGGAGGCAGTGGTGGAAACCCCAGCAGCGGTGGCAGTGGCTACTGCGCCGGCAAGGCCAATGGACTCTACCCTGACCCATCCAACAAGAACCAGTTCTGGCACTGCATGAACGGCGAGACCTACAACCAGCACTGCGCCGCCGGCCTGGTCTTCGACCCCAGCTGCTCTTGCTGCAATTGGGCTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59468 lncRNA downstream 186087 46803611 ~ 46838764 (-) True G47661
TU59342 lncRNA downstream 722151 46299161 ~ 46302700 (-) True AMCG00013903
TU59313 lncRNA downstream 786337 46231325 ~ 46238514 (-) True G47538
TU59095 lncRNA downstream 1101937 45921106 ~ 45922914 (-) True G47391
TU59536 lncRNA upstream 31158 47057539 ~ 47120601 (-) True G47718
TU59534 lncRNA upstream 44962 47071343 ~ 47075028 (-) True G47717
TU59609 lncRNA upstream 199420 47225801 ~ 47227254 (-) True G47766
TU59662 lncRNA upstream 469030 47495411 ~ 47495684 (-) True G47807
TU59664 lncRNA upstream 514182 47540563 ~ 47545591 (-) True G47809
AMCG00013921 mRNA downstream 7124 47015056 ~ 47017727 (-) True AMCG00013921
AMCG00013920 mRNA downstream 24637 46995142 ~ 47000214 (-) True AMCG00013920
AMCG00013915 mRNA downstream 39181 46976691 ~ 46985670 (-) True AMCG00013915
AMCG00013916 mRNA downstream 48661 46970259 ~ 46976190 (-) True AMCG00013916
AMCG00013914 mRNA downstream 78463 46930575 ~ 46946388 (-) True AMCG00013914
AMCG00013926 mRNA upstream 75198 47101579 ~ 47112942 (-) True AMCG00013926
AMCG00013925 mRNA upstream 124710 47151091 ~ 47162001 (-) True AMCG00013925
AMCG00013932 mRNA upstream 162214 47188595 ~ 47200867 (-) True AMCG00013932
AMCG00013929 mRNA upstream 174874 47201255 ~ 47212425 (-) True AMCG00013929
AMCG00013928 mRNA upstream 187218 47213599 ~ 47217346 (-) True AMCG00013928
TU59474 other downstream 149481 46871869 ~ 46875370 (-) True G47666
TU59251 other downstream 861364 46160539 ~ 46163487 (-) True G47501
TU59204 other downstream 941309 46075429 ~ 46083542 (-) True AMCG00013890
TU59142 other downstream 1050540 45963891 ~ 45974311 (-) True AMCG00013883
TU59115 other downstream 1100503 45923922 ~ 45924348 (-) False AMCG00013882
TU59572 other upstream 171962 47198343 ~ 47200897 (-) False AMCG00013932
TU59752 other upstream 838469 47864850 ~ 47868863 (-) True AMCG00013946
TU59777 other upstream 941044 47967425 ~ 47974915 (-) True G47896
TU60179 other upstream 1791602 48817983 ~ 48821156 (-) False AMCG00013991
TU60180 other upstream 1791602 48817983 ~ 48821156 (-) False AMCG00013991

Expression Profile