Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014103 |
| length | 1209 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 5 |
| gene id | AMCG00014103 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 1872749 ~ 1878960 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K02131 | ATPeF0F6, ATP5J; F-type H+-transporting ATPase subunit 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84650 | lncRNA | upstream | 30304 | 1840165 ~ 1842445 (+) | True | G67789 |
| TU84655 | lncRNA | upstream | 50991 | 1820573 ~ 1821758 (+) | True | G67792 |
| TU84544 | lncRNA | upstream | 596533 | 1275991 ~ 1276216 (+) | True | G67699 |
| TU84543 | lncRNA | upstream | 622435 | 1250099 ~ 1250314 (+) | True | G67698 |
| TU84535 | lncRNA | upstream | 849936 | 981839 ~ 1022813 (+) | True | G67690 |
| TU84797 | lncRNA | downstream | 198343 | 2077303 ~ 2077602 (+) | True | G67882 |
| TU84819 | lncRNA | downstream | 269489 | 2148449 ~ 2148654 (+) | True | G67899 |
| TU84829 | lncRNA | downstream | 454531 | 2333491 ~ 2333944 (+) | True | G67907 |
| TU84830 | lncRNA | downstream | 471169 | 2350129 ~ 2373305 (+) | True | G67908 |
| TU84919 | lncRNA | downstream | 867284 | 2746244 ~ 2755484 (+) | True | G67983 |
| AMCG00014102 | mRNA | upstream | 3307 | 1858678 ~ 1869442 (+) | True | AMCG00014102 |
| AMCG00014104 | mRNA | upstream | 34742 | 1835830 ~ 1838007 (+) | False | AMCG00014104 |
| AMCG00014101 | mRNA | upstream | 39389 | 1825855 ~ 1833360 (+) | True | AMCG00014101 |
| AMCG00014100 | mRNA | upstream | 59451 | 1799682 ~ 1813298 (+) | True | AMCG00014100 |
| AMCG00014095 | mRNA | upstream | 308175 | 1545327 ~ 1564574 (+) | True | AMCG00014095 |
| AMCG00014111 | mRNA | downstream | 21502 | 1900462 ~ 1902687 (+) | False | AMCG00014111 |
| AMCG00014106 | mRNA | downstream | 42379 | 1921339 ~ 1925062 (+) | True | AMCG00014106 |
| AMCG00014112 | mRNA | downstream | 129642 | 2008602 ~ 2022266 (+) | True | AMCG00014112 |
| AMCG00014113 | mRNA | downstream | 145638 | 2024598 ~ 2028511 (+) | True | AMCG00014113 |
| AMCG00014120 | mRNA | downstream | 204466 | 2083426 ~ 2113366 (+) | True | AMCG00014120 |
| TU84663 | other | upstream | 34624 | 1835432 ~ 1838125 (+) | True | AMCG00014104 |
| TU84560 | other | upstream | 388656 | 1483785 ~ 1484093 (+) | False | AMCG00014099 |
| TU84388 | other | upstream | 1765627 | 58449 ~ 107122 (+) | True | G67577 |
| TU84672 | other | downstream | 131 | 1879091 ~ 1881041 (+) | True | G67801 |
| TU84682 | other | downstream | 21260 | 1900220 ~ 1902615 (+) | True | AMCG00014111 |
| TU84815 | other | downstream | 247912 | 2126872 ~ 2130145 (+) | True | G67896 |
| TU84895 | other | downstream | 827880 | 2706840 ~ 2710329 (+) | False | AMCG00014146 |
| TU84896 | other | downstream | 827880 | 2706840 ~ 2710329 (+) | False | AMCG00014146 |
